RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SLC25A14O95258 325 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A6P19224 532 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 WT1P19544 449 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A1P22309 533 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A4P22310 534 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 PSMB4P28070 264 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A3P35503 534 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 FASLGP48023 281 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 ATP5OP48047 213 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 MAPK10P53779 464 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 MSLNQ13421 630 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 LRP8Q14114 963 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 IYDQ6PHW0 289 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 ZFAND4Q86XD8 727 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 JAMLQ86YT9 394 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 USP7Q93009 1102 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 FICDQ9BVA6 458 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 OSBPL8Q9BZF1 889 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 GBA3Q9H227 469 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A7Q9HAW7 530 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A10Q9HAW8 530 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A8Q9HAW9 530 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 TRIM39Q9HCM9 518 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 IL17CQ9P0M4 197 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 RSPH14Q9UHP6 348 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 AHCTF1Q8WYP5 2266 aa16.52■□□□□ 0.23
PDLIM7-201ENST00000355572 HACD1B0YJ81 288 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 FGF3P11487 239 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 BRAFP15056 766 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 PTPN7P35236 360 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 ADRA1AP35348 466 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 NFATC2Q13469 925 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 CHRNA6Q15825 494 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 XKR5Q6UX68 686 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 BZW1Q7L1Q6 419 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 GPR155Q7Z3F1 870 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 PIM3Q86V86 326 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 CCDC110Q8TBZ0 833 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 BLOC1S5Q8TDH9 187 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 PLEKHG4BQ96PX9 1271 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 ZSCAN5AQ9BUG6 496 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 TBC1D10AQ9BXI6 508 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 STRADBQ9C0K7 418 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 OCIAD1Q9NX40 245 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 KCNK4Q9NYG8 393 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 OGFRQ9NZT2 677 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 ZNF624Q9P2J8 865 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 R3HDM2Q9Y2K5 976 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 PCDHGA7Q9Y5G6 932 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
PDLIM7-201ENST00000355572 MACROD2A1Z1Q3 448 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 FTCDO95954 541 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 RBP3P10745 1247 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 THRAP10827 490 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 HMGCLP35914 325 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 GPR3P46089 330 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 CTSCP53634 463 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 LIMK2P53671 638 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 EIF3EP60228 445 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 UBE2IP63279 158 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 HHEXQ03014 270 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 EIF3IQ13347 325 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 XRCC4Q13426 336 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 SPARCL1Q14515 664 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 ANKRD20A2Q5SQ80 823 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 ANKRD20A1Q5TYW2 823 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 ANKRD20A3Q5VUR7 823 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 KIAA1614Q5VZ46 1190 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 FAM151BQ6UXP7 276 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 RMI1Q9H9A7 625 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 DNAJC16Q9Y2G8 782 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 ARL5AQ9Y689 179 aa16.5■□□□□ 0.23
PDLIM7-201ENST00000355572 PIKFYVEQ9Y2I7 2098 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 CCDC66A2RUB6 948 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 KCNN4O15554 427 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 MTSS1O43312 755 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 EPOP01588 193 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 JMJD7P0C870 316 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 F3P13726 295 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 ZNF7P17097 686 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 SLC19A1P41440 591 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 RWDD2BP57060 319 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 COPS2P61201 443 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 MPP3Q13368 585 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 SQSTM1Q13501 440 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 SEPT7Q16181 437 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 DENND5AQ6IQ26 1287 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 VASH2Q86V25 355 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 RNF31Q96EP0 1072 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 VPS35Q96QK1 796 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 VAT1Q99536 393 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 DPH1Q9BZG8 443 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 SEMA4CQ9C0C4 833 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 OSGEPL1Q9H4B0 414 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 ACSL6Q9UKU0 697 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms