RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 A0A1W2PQ72 361 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 OR51F1A6NGY5 319 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ARL5CA6NH57 179 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 SYCE1LA8MT33 242 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 M0QZ92 97 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TRIM38O00635 465 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 F9P00740 461 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ALOX12P18054 663 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ARNTP27540 789 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 GTF2E2P29084 291 aaKnown RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 LRPAP1P30533 357 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 GNG2P59768 71 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 SCAPQ12770 1279 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 STK11Q15831 433 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 XKR4Q5GH76 650 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 BTBD8Q5XKL5 378 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 CXCL17Q6UXB2 119 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 PAGE2Q7Z2X7 111 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 PGAM4Q8N0Y7 254 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 DHRSXQ8N5I4 330 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 STYXQ8WUJ0 223 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ISL2Q96A47 359 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 C2orf49Q9BVC5 232 aaPredicted RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 REXO4Q9GZR2 422 aaKnown RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 GLOD4Q9HC38 313 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TNFRSF12AQ9NP84 129 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 FBXO5Q9UKT4 447 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 MYADML2A6NDP7 307 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 HHLA1C9JL84 531 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ITGB1P05556 798 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 DBTP11182 482 aaKnown RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 GRIK1P39086 918 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 GEN1Q17RS7 908 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 FBXO48Q5FWF7 155 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TSTD2Q5T7W7 516 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 CLEC6AQ6EIG7 209 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 BHLHA9Q7RTU4 235 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 LIMS2Q7Z4I7 341 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 LINC00523Q86TU6 105 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 SPPL2CQ8IUH8 684 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ARMC8Q8IUR7 673 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 LRRC49Q8IUZ0 686 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TP53I13Q8NBR0 393 aaPredicted RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 LEMD2Q8NC56 503 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 OR9I1Q8NGQ6 314 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TFAP2CQ92754 450 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 VPS33AQ96AX1 596 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TBATAQ96M53 351 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 CSF3RQ99062 836 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 SEPHS2Q99611 448 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 KIFC1Q9BW19 673 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 NT5MQ9NPB1 228 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 SLC30A1Q9Y6M5 507 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 HEATR9A2RTY3 570 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 NUAK1O60285 661 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 GPC4O75487 556 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 RSL1D1O76021 490 aaKnown RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 SEC24AO95486 1093 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 SNAP29O95721 258 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 GLULP15104 373 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PPP2R2BQ00005 443 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 TNK2Q07912 1038 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 AQP6Q13520 282 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 TAF12Q16514 161 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 AGKQ53H12 422 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 COLEC12Q5KU26 742 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 RP9Q8TA86 221 aaKnown RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 ZNF420Q8TAQ5 688 aaPredicted RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 GPR152Q8TDT2 470 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 ATL1Q8WXF7 558 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 CCDC120Q96HB5 630 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 TCF12Q99081 682 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 VAT1Q99536 393 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 RPRD1BQ9NQG5 326 aaKnown RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 PAQR5Q9NXK6 330 aaPredicted RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 CRYL1Q9Y2S2 319 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 AAR2Q9Y312 384 aaKnown RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 C12orf71A8MTZ7 269 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PDZK1P1A8MUH7 402 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PEX14O75381 377 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 APOA4P06727 396 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PIRTP0C851 137 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 BMP4P12644 408 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 SPNP16150 400 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PRKACAP17612 351 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PCSK1P29120 753 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PTGS2P35354 604 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 HADHAP40939 763 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 CASP2P42575 452 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 SLC7A2P52569 658 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 CDH13P55290 713 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 VBP1P61758 197 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 TRIM32Q13049 653 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 NHSL2Q5HYW2 709 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 GNASQ5JWF2 1037 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 DENND5AQ6IQ26 1287 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 GALNT13Q8IUC8 556 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 ARHGAP12Q8IWW6 846 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms