RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TIMM23O14925 209 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SELENOFO60613 162 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ZC3H11AO75152 810 aaKnown RBP eCLIP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 AKAP3O75969 853 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TFPIP10646 304 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 UNGP13051 313 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 STMN1P16949 149 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CALRP27797 417 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 FOLR3P41439 243 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OAZ1P54368 228 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SMN1Q16637 294 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HIST2H2ACQ16777 129 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TCTN1Q2MV58 587 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 GLRA4Q5JXX5 417 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 FIGLAQ6QHK4 219 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 Q6ZPA2 131 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF551Q7Z340 670 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HAUS6Q7Z4H7 955 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 FOXRED2Q8IWF2 684 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 UNC45BQ8IWX7 931 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 APCDD1Q8J025 514 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 AFAP1Q8N556 730 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ADPRHL1Q8NDY3 354 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OR2AJ1Q8NGZ0 328 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TBC1D16Q8TBP0 767 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ORAI1Q96D31 301 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MYEOVQ96EZ4 313 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OTUB1Q96FW1 271 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RBM18Q96H35 190 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PLEKHG4BQ96PX9 1271 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 C16orf70Q9BSU1 422 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TEX13BQ9BXU2 312 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 KRT23Q9C075 422 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MOV10Q9HCE1 1003 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CACNG4Q9UBN1 327 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NDRG3Q9UGV2 375 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CARD8Q9Y2G2 431 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MAGI1Q96QZ7 1491 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 LRRC72A6NJI9 287 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PLK4O00444 970 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MPPED1O15442 326 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF217O75362 1048 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NXPH3O95157 252 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TTLL1O95922 423 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HNRNPCP07910 306 aaKnown RBP eCLIP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ZCCHC18P0CG32 403 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ADRA2CP18825 462 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PSMB4P28070 264 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ADRA1BP35368 520 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 YWHAZP63104 245 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MRPS35P82673 323 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TRA2AQ13595 282 aaKnown RBP eCLIP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 KRT33BQ14525 404 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PDK1Q15118 436 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD20A4Q4UJ75 823 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD20A8PQ5CZ79 823 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD20A2Q5SQ80 823 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD20A1Q5TYW2 823 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD20A3Q5VUR7 823 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM268Q5VZI3 342 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 KRT79Q5XKE5 535 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 AADACL2Q6P093 401 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ERN2Q76MJ5 926 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 GSTA5Q7RTV2 222 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RABEPKQ7Z6M1 372 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TSPAN33Q86UF1 283 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HM13Q8TCT9 377 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ACTRT2Q8TDY3 377 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SLC25A28Q96A46 364 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SPSB1Q96BD6 273 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 GFI1Q99684 422 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PCGF1Q9BSM1 259 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HAUS8Q9BT25 410 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MKKSQ9NPJ1 570 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ACSS1Q9NUB1 689 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ASB6Q9NWX5 421 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SLC8A2Q9UPR5 921 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NUDCQ9Y266 331 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TNFSF13BQ9Y275 285 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MAU2Q9Y6X3 613 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ACEP12821 1306 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EMSYQ7Z589 1322 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SZT2Q5T011 3432 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 GAGE12BA1L429 117 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 GAGE12HA6NDE8 117 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM202A6NGA9 273 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 HEPACAM2A8MVW5 462 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TTC34A8MYJ7 566 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF263O14978 683 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PLAUP00749 431 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CYP19A1P11511 503 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EPORP19235 508 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TCF7P36402 384 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CASP9P55211 416 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PMPCAQ10713 525 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TROAPQ12815 778 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 NPRL3Q12980 569 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PTPRRQ15256 657 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PLK5Q496M5 336 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CBWD6Q4V339 395 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms