RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RNF219Q5W0B1 726 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 KDELC1Q6UW63 502 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 LINC00523Q86TU6 105 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 APCDD1Q8J025 514 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 IPMKQ8NFU5 416 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 OR9I1Q8NGQ6 314 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 FAM110BQ8TC76 370 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 SH3RF2Q8TEC5 729 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 MYLIPQ8WY64 445 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 RSPRY1Q96DX4 576 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ELMO2Q96JJ3 720 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 EXOC2Q96KP1 924 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 SPAG4Q9NPE6 437 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 CD300AQ9UGN4 299 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 A0A1B0GVM2 712 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 TCRBV3S1A0A5B6 114 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 HEATR9A2RTY3 570 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 H3BNH8 94 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 K7ERQ8 282 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PSMD12O00232 456 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 UBDO15205 165 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 GLP2RO95838 553 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ATP5F1P24539 256 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 RPL10P27635 214 aaKnown RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 CD86P42081 329 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ALDH3B2P48448 385 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PLK1P53350 603 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 DNAJB13P59910 316 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 IL10RBQ08334 325 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 CSHL1Q14406 222 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PTPRRQ15256 657 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PCSK7Q16549 785 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PARP15Q460N3 678 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 MARC1Q5VT66 337 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF470Q6ECI4 717 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 LAYNQ6UX15 382 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 RANBP10Q6VN20 620 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 TMEM25Q86YD3 366 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 CARNMT1Q8N4J0 409 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 IMP4Q96G21 291 aaKnown RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 TBL1YQ9BQ87 522 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 SLC39A3Q9BRY0 314 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 HAUS8Q9BT25 410 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 MEAF6Q9HAF1 191 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 SP110Q9HB58 689 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 DUS2Q9NX74 493 aaKnown RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 THEGQ9P2T0 379 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 GMPR2Q9P2T1 348 aaKnown RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 INTS6Q9UL03 887 aaKnown RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 TRAV19A0A0A6YYK7 116 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 AP3B1O00203 1094 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CBX4O00257 560 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 PFDN1O60925 122 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CLDN11O75508 207 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 SLC7A1P30825 629 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 YBEYP58557 167 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 TRAP1Q12931 704 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 DCTN2Q13561 401 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 SQLEQ14534 574 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 NHSL2Q5HYW2 709 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 PITRM1Q5JRX3 1037 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 RBM20Q5T481 1227 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 IL31Q6EBC2 164 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 KRT80Q6KB66 452 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 TIGD7Q6NT04 549 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CYHR1Q6ZMK1 362 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CUZD1Q86UP6 607 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ELMOD1Q8N336 334 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 TADA1Q96BN2 335 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 PPWD1Q96BP3 646 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 UHRF1Q96T88 793 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 FEM1AQ9BSK4 669 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 FICDQ9BVA6 458 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 MAGEH1Q9H213 219 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 RHBDL2Q9NX52 303 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 TMEM181Q9P2C4 612 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CIDEBQ9UHD4 219 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 MYRFQ9Y2G1 1151 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 AAR2Q9Y312 384 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 A0A0U1RQS6 177 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ATP6AP2A0A1C7CYW4 349 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 A8MT66 165 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 SOCS2O14508 198 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 HTRA2O43464 458 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 KDELR3O43731 214 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 TIPRLO75663 272 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ATP6AP2O75787 350 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 IPO13O94829 963 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 RHOCP08134 193 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CD70P32970 193 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CSKP41240 450 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CD151P48509 253 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 POLD2P49005 469 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CDK9P50750 372 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 SCNN1BP51168 640 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms