RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 PCDHB1Q9Y5F3 818 aa17.83■□□□□ 0.44
HDAC10-202ENST00000349505 A0A0U1RQS6 177 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 C1orf232A0A0U1RR37 186 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 TMEM233B4DJY2 109 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SUPT7LO94864 414 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 JUNP05412 331 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 RB1P06400 928 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 TCF3P15923 654 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 CTSOP43234 321 aaPredicted RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 HSPA13P48723 471 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 CDKN3Q16667 212 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SLC5A9Q2M3M2 681 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 UNC50Q53HI1 259 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 UGT3A1Q6NUS8 523 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 C22orf39Q6P5X5 142 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 TAS2R42Q7RTR8 314 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 CEP70Q8NHQ1 597 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 IRF7Q92985 503 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 BBS2Q9BXC9 721 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 CPEB1Q9BZB8 566 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 MTIF3Q9H2K0 278 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 EPB41L1Q9H4G0 881 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 ZNF385DQ9H6B1 395 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SLC25A13Q9UJS0 675 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 FNDC3AQ9Y2H6 1198 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 ZNF106Q9H2Y7 1883 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SMIM31A0A1B0GVY4 71 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 GOLGA8CPA6NN73 597 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SYCE1LA8MT33 242 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 NEDD8-MDP1E9PL57 170 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 GKP32189 559 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 HNF1BP35680 557 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 STK19P49842 368 aaPredicted RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 NAA20P61599 178 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 CAMK1Q14012 370 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 DMC1Q14565 340 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 ZNF77Q15935 545 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 MYLK3Q32MK0 819 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PRSS36Q5K4E3 855 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 CBARPQ8N350 705 aaPredicted RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PCDH20Q8N6Y1 951 aaKnown RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PAF1Q8N7H5 531 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PTGR2Q8N8N7 351 aaPredicted RBP17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PYDC1Q8WXC3 89 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 VOPP1Q96AW1 172 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 ECHDC3Q96DC8 303 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 OTUB2Q96DC9 234 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PPP1R36Q96LQ0 422 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 MEAF6Q9HAF1 191 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SPHK2Q9NRA0 654 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 RNF112Q9ULX5 631 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 PPIL1Q9Y3C6 166 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 SCN8AQ9UQD0 1980 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 NOTCH4Q99466 2003 aa17.82■□□□□ 0.44
HDAC10-202ENST00000349505 UBXN8O00124 270 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 SDHDO14521 159 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 PRMT5O14744 637 aaPredicted RBP17.81■□□□□ 0.44
HDAC10-202ENST00000349505 NIPSNAP2O75323 286 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 UBTFL6P0CB48 400 aaPredicted RBP17.81■□□□□ 0.44
HDAC10-202ENST00000349505 PABPC1P11940 636 aaKnown RBP17.81■□□□□ 0.44
HDAC10-202ENST00000349505 EPCAMP16422 314 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 EN2P19622 333 aaPredicted RBP17.81■□□□□ 0.44
HDAC10-202ENST00000349505 IRS1P35568 1242 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 INHBCP55103 352 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 LIN52Q52LA3 116 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 OGFRL1Q5TC84 451 aaPredicted RBP17.81■□□□□ 0.44
HDAC10-202ENST00000349505 AP1ARQ63HQ0 302 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 ELMSAN1Q6PJG2 1045 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 SNX20Q7Z614 316 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 CD200R1Q8TD46 325 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 NCSTNQ92542 709 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 LENG8Q96PV6 779 aaPredicted RBP17.81■□□□□ 0.44
HDAC10-202ENST00000349505 DPP7Q9UHL4 492 aa17.81■□□□□ 0.44
HDAC10-202ENST00000349505 E5RI56 91 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 GAPDHSO14556 408 aaPredicted RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 PRAMEF1O95521 474 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 TSPAN12O95859 305 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 POU2F2P09086 479 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 VCLP18206 1134 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 RPS3P23396 243 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 PTPN5P54829 565 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 IL2P60568 153 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 CYLC2Q14093 348 aaPredicted RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 PFKFB4Q16877 469 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 MMEL1Q495T6 779 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 RARS2Q5T160 578 aaKnown RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 LYPLAL1Q5VWZ2 237 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 NXNQ6DKJ4 435 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 ASTLQ6HA08 431 aaPredicted RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 RPS27LQ71UM5 84 aaKnown RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 EXT2Q93063 718 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 GALPQ9UBC7 116 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 TRAF6Q9Y4K3 522 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 COMMD3-BMI1R4GMX3 469 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 MYOFQ9NZM1 2061 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 TRBV5-4A0A0C4DH59 114 aa17.8■□□□□ 0.44
HDAC10-202ENST00000349505 UBFD1O14562 309 aaKnown RBP17.8■□□□□ 0.44
HDAC10-202ENST00000349505 DENRO43583 198 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms