RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 USE1Q9NZ43 259 aa10.26□□□□□ -0.77
CHRNA1-202ENST00000348749 TYW5A2RUC4 315 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 PABPN1LA6NDY0 278 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 NEMP2A6NFY4 417 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 USP12O75317 370 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 KATNA1O75449 491 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SUPT7LO94864 414 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TXNP10599 105 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TCF3P15923 654 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SPNP16150 400 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ADRA1BP35368 520 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 CLK3P49761 638 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 IST1P53990 364 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TPD52P55327 224 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 P2RX3P56373 397 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 VBP1P61758 197 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 YBX1P67809 324 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 LIPEQ05469 1076 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 PIGFQ07326 219 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ZNF460Q14592 562 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 PCID2Q5JVF3 399 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 C9orf57Q5W0N0 161 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 KIAA1841Q6NSI8 718 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SLC27A1Q6PCB7 646 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ARMCX2Q7L311 632 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 PAGE2Q7Z2X7 111 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 C14orf80Q86SX3 495 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SLC22A9Q8IVM8 553 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 MFSD6LQ8IWD5 586 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TMEM130Q8N3G9 435 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 C7orf31Q8N865 590 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FBLIM1Q8WUP2 373 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TTC9Q92623 222 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 RORBQ92753 470 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TRIM63Q969Q1 353 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TEKT5Q96M29 485 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 DUSP16Q9BY84 665 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 GSTO2Q9H4Y5 243 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 IGSF5Q9NSI5 407 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FBXO5Q9UKT4 447 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 AAR2Q9Y312 384 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 OAS3Q9Y6K5 1087 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 MAU2Q9Y6X3 613 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ASB14A6NK59 587 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SYCE1LA8MT33 242 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 PIRO00625 290 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ICMTO60725 284 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 MT-ND1P03886 318 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 UBL4AP11441 157 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 NCK1P16333 377 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ERCC2P18074 760 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 AGXTP21549 392 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 HRH2P25021 359 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ADORA2BP29275 332 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 RYKP34925 604 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 CLCNKBP51801 687 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FADDQ13158 208 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ACAP2Q15057 778 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FAM83EQ2M2I3 478 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FBXO47Q5MNV8 452 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SYT6Q5T7P8 510 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ZNF544Q6NX49 715 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ALKAL1Q6UXT8 129 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 IL17RDQ8NFM7 739 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 EMID1Q96A84 441 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 NACC2Q96BF6 587 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FAM149B1Q96BN6 582 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 C3orf30Q96M34 536 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 RNF145Q96MT1 663 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SEPHS2Q99611 448 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 MLPHQ9BV36 600 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FAM49AQ9H0Q0 323 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 MMP27Q9H306 513 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SLA2Q9H6Q3 261 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 AKTIPQ9H8T0 292 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 TM9SF3Q9HD45 589 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 SDR39U1Q9NRG7 319 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 INTS6Q9UL03 887 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 FZD1Q9UP38 647 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 A3GALT2U3KPV4 340 aa10.25□□□□□ -0.77
CHRNA1-202ENST00000348749 NRCAMQ92823 1304 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 M0QYT0 321 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 KCNK1O00180 336 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 UBFD1O14562 309 aaKnown RBP10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 TNPO2O14787 897 aaKnown RBP10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 ZBTB24O43167 697 aaPredicted RBP10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 TBX1O43435 398 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 F9P00740 461 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 LGALS2P05162 132 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 RAP2AP10114 183 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 KCNA5P22460 613 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 WARSP23381 471 aaKnown RBP10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 MRPL19P49406 292 aaKnown RBP10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 TPI1P60174 286 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 ISL1P61371 349 aa10.24□□□□□ -0.77
CHRNA1-202ENST00000348749 POU4F1Q01851 419 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms