RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 XAF1Q6GPH4 301 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 SLC39A5Q6ZMH5 540 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 SPATA19Q7Z5L4 167 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 ZNF280BQ86YH2 543 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 TMEM125Q96AQ2 219 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 FAM149B1Q96BN6 582 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 CTRCQ99895 268 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 KCTD14Q9BQ13 255 aaPredicted RBP15.77■□□□□ 0.11
HMGA1-202ENST00000347617 LHPPQ9H008 270 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 FBXO5Q9UKT4 447 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 ERVK-11Q9UQG0 969 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 SNX5Q9Y5X3 404 aa15.77■□□□□ 0.11
HMGA1-202ENST00000347617 SLC22A1O15245 554 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 INPP4BO15327 924 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 PRSS23O95084 383 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 F9P00740 461 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 ALDOCP09972 364 aaKnown RBP15.76■□□□□ 0.11
HMGA1-202ENST00000347617 THRBP10828 461 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 CDH1P12830 882 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 HOXB8P17481 243 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-202ENST00000347617 TPH1P17752 444 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 CRHBPP24387 322 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 GRK3P35626 688 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 HPCAL1P37235 193 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 OPRL1P41146 370 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 SLC1A2P43004 574 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 PCYT1AP49585 367 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 GSK3BP49841 420 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 CSHL1Q14406 222 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 NEPROQ6NW34 567 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 EFL1Q7Z2Z2 1120 aaKnown RBP15.76■□□□□ 0.11
HMGA1-202ENST00000347617 MFSD6LQ8IWD5 586 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 ABI1Q8IZP0 508 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 AADATQ8N5Z0 425 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 OR9I1Q8NGQ6 314 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 BPIFB1Q8TDL5 484 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 USP33Q8TEY7 942 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 MUL1Q969V5 352 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 MYLPFQ96A32 169 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 FCRL5Q96RD9 977 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 TMEM175Q9BSA9 504 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 MRPL9Q9BYD2 267 aaKnown RBP15.76■□□□□ 0.11
HMGA1-202ENST00000347617 ALG2Q9H553 416 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 MOV10Q9HCE1 1003 aaKnown RBP15.76■□□□□ 0.11
HMGA1-202ENST00000347617 ENTPD7Q9NQZ7 604 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 FBXO8Q9NRD0 319 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 SDR39U1Q9NRG7 319 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-202ENST00000347617 WBP1LQ9NX94 342 aa15.76■□□□□ 0.11
HMGA1-202ENST00000347617 SYNCRIPO60506 623 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 TPST1O60507 370 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 SNAP29O95721 258 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 OXTRP30559 389 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 GSSP48637 474 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 PLA2G16P53816 162 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 PITRM1Q5JRX3 1037 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 ZNF678Q5SXM1 525 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 THOC7Q6I9Y2 204 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 BLOC1S3Q6QNY0 202 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 CRTC3Q6UUV7 619 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 RAB44Q7Z6P3 723 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 FKBP10Q96AY3 582 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 FUBP3Q96I24 572 aaKnown RBP eCLIP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 CASD1Q96PB1 797 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 PGLYRP2Q96PD5 576 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 SLC39A3Q9BRY0 314 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 COLEC11Q9BWP8 271 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 AKTIPQ9H8T0 292 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 EGFL7Q9UHF1 273 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 MAGEL2Q9UJ55 1249 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 TMEM98Q9Y2Y6 226 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 A0A1W2PP18 115 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 NRP1O14786 923 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 UGT2B11O75310 529 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 OXSR1O95747 527 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 ITGB1P05556 798 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 F7P08709 466 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 HOXB6P17509 224 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 CAPN3P20807 821 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 TGM1P22735 817 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 YWHAQP27348 245 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 IDUAP35475 653 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 POLR2IP36954 125 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 ARSFP54793 590 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 CDC20Q12834 499 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 ELAVL2Q12926 359 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 CTBP1Q13363 440 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 MRPL58Q14197 206 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 ZNF460Q14592 562 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 RPS6KA2Q15349 733 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 NFE2Q16621 373 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 PHKG1Q16816 387 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 DGUOKQ16854 277 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 UGT3A2Q3SY77 523 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 LACC1Q8IV20 430 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 DENND6AQ8IWF6 608 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 SPARTQ8N0X7 666 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 OR10T2Q8NGX3 314 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 DPF3Q92784 378 aa15.75■□□□□ 0.11
HMGA1-202ENST00000347617 POP5Q969H6 163 aaKnown RBP15.75■□□□□ 0.11
HMGA1-202ENST00000347617 SDCCAG3Q96C92 435 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms