RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CCDC154A6NI56 674 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 DCLK1O15075 740 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 C1RP00736 705 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 MYL3P08590 195 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 CYP4B1P13584 511 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 CLK1P49759 484 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 UFM1P61960 85 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 POU4F1Q01851 419 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 STXBP2Q15833 593 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 ZNF678Q5SXM1 525 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 ZDHHC17Q8IUH5 632 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 SLC22A9Q8IVM8 553 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 PHF10Q8WUB8 498 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 TP53INP1Q96A56 240 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 SLIRPQ9GZT3 109 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 GIMAP4Q9NUV9 329 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 RCOR3Q9P2K3 495 aaPredicted RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 UTS2RQ9UKP6 389 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 INTS6Q9UL03 887 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 LOC100130705A0A1B0GUX0 176 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 A0A1W2PP18 115 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 AZIN1O14977 448 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 PMPCBO75439 489 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 CDK14O94921 469 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ANGPTL1O95841 491 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 DBTP11182 482 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 UBA1P22314 1058 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 CHRNA4P43681 627 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 GABARAPL2P60520 117 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ADIGQ0VDE8 80 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 NPTX1Q15818 432 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 SLC25A52Q3SY17 297 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 SYPL2Q5VXT5 272 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 GALNT5Q7Z7M9 940 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 PTRH1Q86Y79 214 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 DEPDC4Q8N2C3 294 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 PTGR2Q8N8N7 351 aaPredicted RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 PPHLN1Q8NEY8 458 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 HSFY1Q96LI6 401 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 TMEM246Q9BRR3 403 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 POLG2Q9UHN1 485 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 SHROOM3Q8TF72 1996 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ASPDHA6ND91 283 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 IL12AP29459 219 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 FSCN1Q16658 493 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 WDR45BQ5MNZ6 344 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 BEND5Q7L4P6 421 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 PIM3Q86V86 326 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 RIMKLAQ8IXN7 391 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 DTWD1Q8N5C7 304 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ZNF560Q96MR9 790 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 OR2B2Q9GZK3 357 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 SDR39U1Q9NRG7 319 aaPredicted RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 PIGVQ9NUD9 493 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 AGRPO00253 132 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 CCL22O00626 93 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 SSX4O60224 188 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ST13P50502 369 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 PFKFB4Q16877 469 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 SYT16Q17RD7 645 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 PLA2G4EQ3MJ16 856 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ZCCHC8Q6NZY4 707 aaKnown RBP15.23■□□□□ 0.03
LMNA-201ENST00000347559 BTBD2Q9BX70 525 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 TUBB1Q9H4B7 451 aa15.23■□□□□ 0.03
LMNA-201ENST00000347559 ZSCAN5BA6NJL1 495 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 PRMT5O14744 637 aaPredicted RBP15.22■□□□□ 0.03
LMNA-201ENST00000347559 KMOO15229 486 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 RAP2AP10114 183 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ISL1P61371 349 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 TOP3AQ13472 1001 aaPredicted RBP15.22■□□□□ 0.03
LMNA-201ENST00000347559 SIM2Q14190 667 aaPredicted RBP15.22■□□□□ 0.03
LMNA-201ENST00000347559 NOMO2Q5JPE7 1267 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ENPP6Q6UWR7 440 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 C11orf74Q86VG3 221 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ZNF300Q96RE9 604 aaPredicted RBP15.22■□□□□ 0.03
LMNA-201ENST00000347559 IRF2BPLQ9H1B7 796 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 MUC13Q9H3R2 512 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 FZD8Q9H461 694 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 SNTG2Q9NY99 539 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ANGPTL3Q9Y5C1 460 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 RABGGTBP53611 331 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 TRAF3Q13114 568 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 CLCA4Q14CN2 919 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 FAM214AQ32MH5 1076 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ATAD3CQ5T2N8 411 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 PROSER1Q86XN7 944 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 METTL4Q8N3J2 472 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 BEST2Q8NFU1 509 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 NUDT8Q8WV74 236 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 TEKT5Q96M29 485 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 TBL1YQ9BQ87 522 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 DCSTAMPQ9H295 470 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ZBTB20Q9HC78 741 aaPredicted RBP15.22■□□□□ 0.03
LMNA-201ENST00000347559 PLSCR3Q9NRY6 295 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms