RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 BCLAF3A2AJT9 711 aaKnown RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 PPEF2O14830 753 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 HDAC3O15379 428 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 BUD31P41223 144 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 PRKD1Q15139 912 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 GALNT7Q86SF2 657 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 KBTBD6Q86V97 674 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 FBXW8Q8N3Y1 598 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 OR52K2Q8NGK3 314 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 RMND5BQ96G75 393 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 PIWIL1Q96J94 861 aaKnown RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 LMLNQ96KR4 655 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 KCTD14Q9BQ13 255 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 TDP1Q9NUW8 608 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 H0Y858 1186 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF217O75362 1048 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 CHRNA1P02708 482 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 JUPP14923 745 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 VAV1P15498 845 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 SPAM1P38567 509 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 IRF9Q00978 393 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 LDB1Q86U70 411 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF567Q8N184 647 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 SPATA22Q8NHS9 363 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 LENG8Q96PV6 779 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-202ENST00000346436 TBC1D23Q9NUY8 699 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 AP4S1Q9Y587 144 aa10.82□□□□□ -0.68
CLCN6-202ENST00000346436 A0A0U1RQF3 1178 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 MCIDASD6RGH6 385 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SCN2BO60939 215 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 PLGP00747 810 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 TIMP1P01033 207 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 LYNP07948 512 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RPL17P18621 184 aaKnown RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 PSME3P61289 254 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ABRQ12979 859 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 IRF5Q13568 498 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 LSM12Q3MHD2 195 aaKnown RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 DEPDC1Q5TB30 811 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RHBDF2Q6PJF5 856 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 CLP1Q92989 425 aaKnown RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 PEBP4Q96S96 227 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RACGAP1Q9H0H5 632 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 AP4B1Q9Y6B7 739 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 MYH7BA7E2Y1 1941 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 PAGE1O75459 146 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 TGDSO95455 350 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RPL6Q02878 288 aaKnown RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 DGKKQ5KSL6 1271 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SELENOMQ8WWX9 145 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SPATA9Q9BWV2 254 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 TMEM245Q9H330 911 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 WDR26Q9H7D7 661 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 CYLDQ9NQC7 956 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 EGFL7Q9UHF1 273 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ABCB1P08183 1280 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 CTPS1P17812 591 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 IVDP26440 423 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ITPKBP27987 946 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 CTSOP43234 321 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 CXCR3P49682 368 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 IDH3AP50213 366 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 AQP4P55087 323 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 MPP1Q00013 466 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ACMSDQ8TDX5 336 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 C7orf43Q8WVR3 580 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 KLHL5Q96PQ7 755 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 DTLQ9NZJ0 730 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF229Q9UJW7 825 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 MAFFQ9ULX9 164 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SORCS3Q9UPU3 1222 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 DMTF1Q9Y222 760 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 GLYATL1P3A0A0U1RQE8 302 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 NPC1O15118 1278 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 PLIN3O60664 434 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ACTR1BP42025 376 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SERPINB10P48595 397 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 GSCP56915 257 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ACTR1AP61163 376 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 PURAQ00577 322 aaKnown RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 CHRNB3Q05901 458 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SLC25A52Q3SY17 297 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 C6orf52Q5T4I8 152 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 GRASPQ7Z6J2 395 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-202ENST00000346436 FAM228AQ86W67 206 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 GATAD2AQ86YP4 633 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 TRPC4APQ8TEL6 797 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SNX27Q96L92 541 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RNF145Q96MT1 663 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RERGLQ9H628 205 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 ADPRHL2Q9NX46 363 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 SLC7A8Q9UHI5 535 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 DUSP12Q9UNI6 340 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 NDUFAF1Q9Y375 327 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 RAP2CQ9Y3L5 183 aa10.81□□□□□ -0.68
CLCN6-202ENST00000346436 KLRG2A4D1S0 409 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 HLA-DQA2P01906 255 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PAICSP22234 425 aaKnown RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 GMPRP36959 345 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms