RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 DHFR2Q86XF0 187 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 FLCNQ8NFG4 579 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 SELENOMQ8WWX9 145 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 TMEM79Q9BSE2 394 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 CCDC106Q9BWC9 280 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 ARMC7Q9H6L4 198 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 PCDH12Q9NPG4 1184 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 OPTCQ9UBM4 332 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 ITM2BQ9Y287 266 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 TRAV19A0A0A6YYK7 116 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 A0A1B0GTL3 188 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 GLUD1P00367 558 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 VIPR2P41587 438 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 MAGEA3P43357 314 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 KPNA1P52294 538 aaPredicted RBP13.2□□□□□ -0.3
CASC4-202ENST00000345795 YBEYP58557 167 aaPredicted RBP13.2□□□□□ -0.3
CASC4-202ENST00000345795 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 SLC22A9Q8IVM8 553 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 ZNF276Q8N554 614 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 Q9H521 79 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 ZNF334Q9HCZ1 680 aaPredicted RBP13.2□□□□□ -0.3
CASC4-202ENST00000345795 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 NRP2O60462 931 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 ALDH1A2O94788 518 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
CASC4-202ENST00000345795 APLP1P51693 650 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 CDC16Q13042 620 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 INSCQ1MX18 579 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 LY6G5CQ5SRR4 150 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 STEAP4Q687X5 459 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 GPRIN3Q6ZVF9 776 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 Q6ZVL8 140 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
CASC4-202ENST00000345795 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 CLYBLQ8N0X4 340 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 C2CD4AQ8NCU7 369 aaPredicted RBP13.2□□□□□ -0.3
CASC4-202ENST00000345795 A0A088AWK7 358 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 GLYATL1P3A0A0U1RQE8 302 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 CYP11A1P05108 521 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 CCNFP41002 786 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 PTGR1Q14914 329 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 IL23RQ5VWK5 629 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 EPGNQ6UW88 154 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 APOLD1Q96LR9 279 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 KCTD14Q9BQ13 255 aaPredicted RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 FEM1AQ9BSK4 669 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 ATP13A3Q9H7F0 1226 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 LIMD1Q9UGP4 676 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 MYO10Q9HD67 2058 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 SNNO75324 88 aaPredicted RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 WDR47O94967 919 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 LBPP18428 481 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 SOAT1P35610 550 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 PREPP48147 710 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 ALDH9A1P49189 494 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 UFM1P61960 85 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 MS4A2Q01362 244 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 PWP1Q13610 501 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 KCTD11Q693B1 232 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 KBTBD2Q8IY47 623 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 HJURPQ8NCD3 748 aaPredicted RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 CHST14Q8NCH0 376 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 CCDC126Q96EE4 140 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 SMAD5Q99717 465 aaKnown RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 RERGLQ9H628 205 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 RUBCNLQ9H714 662 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
CASC4-202ENST00000345795 HIDE1A8MVS5 230 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 SLC7A4O43246 635 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 MAN1A2O60476 641 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 IL10P22301 178 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 TTPAP49638 278 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 HTR6P50406 440 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 DSC1Q08554 894 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 NAB1Q13506 487 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 LHX8Q68G74 356 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 ANKRD26P1Q6NSI1 321 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 TMEM207Q6UWW9 146 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
CASC4-202ENST00000345795 ARRDC2Q8TBH0 407 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 ADAMTS6Q9UKP5 1117 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 USP22Q9UPT9 525 aa13.19□□□□□ -0.3
CASC4-202ENST00000345795 PTPRZ1P23471 2315 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 GRID2O43424 1007 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms