RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FGF22Q9HCT0 170 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 ARFGAP3Q9NP61 516 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 BFARQ9NZS9 450 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 NEUROG3Q9Y4Z2 214 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 C1QTNF9BB2RNN3 333 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 E7ESA3 106 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 EIF3HO15372 352 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPM4-202ENST00000344824 TNFP01375 233 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 FGF1P05230 155 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 C1QTNF9P0C862 333 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
TPM4-202ENST00000344824 MAGEA3P43357 314 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 RPL26P61254 145 aaKnown RBP13.7□□□□□ -0.22
TPM4-202ENST00000344824 ELOCQ15369 112 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 BEND6Q5SZJ8 279 aaPredicted RBP13.7□□□□□ -0.22
TPM4-202ENST00000344824 KCTD16Q68DU8 428 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 ZCCHC8Q6NZY4 707 aaKnown RBP13.7□□□□□ -0.22
TPM4-202ENST00000344824 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 LYSMD3Q7Z3D4 306 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 UHMK1Q8TAS1 419 aaKnown RBP13.7□□□□□ -0.22
TPM4-202ENST00000344824 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 PYROXD1Q8WU10 500 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 OR1E3Q8WZA6 343 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 SCAMP4Q969E2 229 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 SYNDIG1Q9H7V2 258 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 EVA1BQ9NVM1 165 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 KCTD5Q9NXV2 234 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 NINJ2Q9NZG7 142 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 PKD2L2Q9NZM6 624 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 SAMD15Q9P1V8 674 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 RPL26L1Q9UNX3 145 aaKnown RBP13.7□□□□□ -0.22
TPM4-202ENST00000344824 WASF3Q9UPY6 502 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 PPIL1Q9Y3C6 166 aa13.7□□□□□ -0.22
TPM4-202ENST00000344824 KNTC1P50748 2209 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 EPG5Q9HCE0 2579 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 CPED1A4D0V7 1026 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 ANKRD66B4E2M5 251 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 AP3B1O00203 1094 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 INPP4BO15327 924 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 ACSL3O95573 720 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 GIMD1P0DJR0 217 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 NPY2RP49146 381 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 STC1P52823 247 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 CDK3Q00526 305 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 PTSQ03393 145 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 SMAD1Q15797 465 aaKnown RBP13.69□□□□□ -0.22
TPM4-202ENST00000344824 CDKN3Q16667 212 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 KYNUQ16719 465 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 CES3Q6UWW8 571 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 GALNT15Q8N3T1 639 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 FSTL5Q8N475 847 aaPredicted RBP13.69□□□□□ -0.22
TPM4-202ENST00000344824 PPHLN1Q8NEY8 458 aaKnown RBP13.69□□□□□ -0.22
TPM4-202ENST00000344824 HNRNPLLQ8WVV9 542 aaKnown RBP13.69□□□□□ -0.22
TPM4-202ENST00000344824 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 STAMBPL1Q96FJ0 436 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 SIGLEC10Q96LC7 697 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
TPM4-202ENST00000344824 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 CLPBQ9H078 707 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 ABCG8Q9H221 673 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 VPS37BQ9H9H4 285 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 CARS2Q9HA77 564 aaKnown RBP13.69□□□□□ -0.22
TPM4-202ENST00000344824 GULP1Q9UBP9 304 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 ZNF711Q9Y462 761 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 TEX264Q9Y6I9 313 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 CSNK1G3Q9Y6M4 447 aa13.69□□□□□ -0.22
TPM4-202ENST00000344824 PRSS38A1L453 326 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 ASMTLO95671 621 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 EPOP01588 193 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 GNPDA1P46926 289 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 DUSP3P51452 185 aaPredicted RBP13.68□□□□□ -0.22
TPM4-202ENST00000344824 C6orf132Q5T0Z8 1188 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 HES3Q5TGS1 186 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 MARK2Q7KZI7 788 aaKnown RBP13.68□□□□□ -0.22
TPM4-202ENST00000344824 TECPR1Q7Z6L1 1165 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 TAF8Q7Z7C8 310 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 GKN2Q86XP6 184 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 PALM2Q8IXS6 379 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 IFI44Q8TCB0 444 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
TPM4-202ENST00000344824 GLMNQ92990 594 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
TPM4-202ENST00000344824 GPR63Q9BZJ6 419 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 PHACTR1Q9C0D0 580 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 IL22Q9GZX6 179 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 ARNT2Q9HBZ2 717 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 ZC3H7BQ9UGR2 993 aaKnown RBP13.68□□□□□ -0.22
TPM4-202ENST00000344824 PCDHGA1Q9Y5H4 931 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 SPO11Q9Y5K1 396 aa13.68□□□□□ -0.22
TPM4-202ENST00000344824 ASPMQ8IZT6 3477 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 USP24Q9UPU5 2620 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 B4DGG1 531 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 LMO7DNF2Z398 122 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms