RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PLK4O00444 970 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 LDB2O43679 373 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 CRTAMO95727 393 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 GSTA1P08263 222 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 TYK2P29597 1187 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 CTSKP43235 329 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 CSNK1DP48730 415 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 QPCTQ16769 361 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 DHRS13Q6UX07 377 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 SERPINA13PQ6UXR4 307 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 KYAT3Q6YP21 454 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 MICALCLQ6ZW33 695 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 SRLQ86TD4 932 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 ZC3HC1Q86WB0 502 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 TRIM42Q8IWZ5 723 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 CACNA2D3Q8IZS8 1091 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 APCDD1Q8J025 514 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 C2CD4AQ8NCU7 369 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 LSM14AQ8ND56 463 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 BLOC1S5Q8TDH9 187 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 SORCS1Q8WY21 1168 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC39A7Q92504 469 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 GRAMD1AQ96CP6 724 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 LMLNQ96KR4 655 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 ORAI3Q9BRQ5 295 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 ADGRE3Q9BY15 652 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 SNX15Q9NRS6 342 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 DCDC2Q9UHG0 476 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 GGT7Q9UJ14 662 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 GRID1Q9ULK0 1009 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 FOXN2P32314 431 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 CD70P32970 193 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 EIF2S3P41091 472 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC1A2P43004 574 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 CD151P48509 253 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 PRAMEP78395 509 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 PDE1CQ14123 709 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 TAF1AQ15573 450 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 PITRM1Q5JRX3 1037 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 ZNF470Q6ECI4 717 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 NEPROQ6NW34 567 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 LCA5Q86VQ0 697 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 RAB3IL1Q8TBN0 382 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 BIRC7Q96CA5 298 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 NXPE2Q96DL1 559 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 SEC16BQ96JE7 1060 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 BTBD1Q9H0C5 482 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 FGFR1OP2Q9NVK5 253 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 HACD3Q9P035 362 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 FTSJ1Q9UET6 329 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC25A13Q9UJS0 675 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 FBXO5Q9UKT4 447 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 CHKBQ9Y259 395 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 FCF1Q9Y324 198 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 PCDHGA1Q9Y5H4 931 aa13.42□□□□□ -0.26
HERPUD1-202ENST00000344114 GOLGA8TH3BQL2 631 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 BIRC5O15392 142 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 TLX3O43711 291 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 DFNA5O60443 496 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 SOCS5O75159 536 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 SEMA4FO95754 770 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 IGSF6O95976 241 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 PRLP01236 227 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 PSMA3P25788 255 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 CD27P26842 260 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 ITPKBP27987 946 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 SERPINB4P48594 390 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 ZBTB16Q05516 673 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 SULT2A1Q06520 285 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 TRAF2Q12933 501 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 ZKSCAN8Q15776 578 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 INAVAQ3KP66 663 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 GLT6D1Q7Z4J2 308 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 PIGWQ7Z7B1 504 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 ANKS4BQ8N8V4 417 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 CCDC197Q8NCU1 140 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 LPCAT1Q8NF37 534 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 SCG3Q8WXD2 468 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 ISG20Q96AZ6 181 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 MYO19Q96H55 970 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 NSMCE3Q96MG7 304 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 INTS6Q9UL03 887 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 MTO1Q9Y2Z2 717 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-202ENST00000344114 A0A1B0GTQ1 180 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 C2orf81A6NN90 581 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 ANKRD66B4E2M5 251 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms