RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SUPT3HO75486 399 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 ECI2O75521 394 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 NFATC1O95644 943 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 JUNP05412 331 aaKnown RBP19.82■□□□□ 0.76
RTN1-202ENST00000342503 AOC1P19801 751 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 VASPP50552 380 aaPredicted RBP19.82■□□□□ 0.76
RTN1-202ENST00000342503 PDCD2Q16342 344 aaPredicted RBP19.82■□□□□ 0.76
RTN1-202ENST00000342503 PFKFB4Q16877 469 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 BRAT1Q6PJG6 821 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 RAB44Q7Z6P3 723 aaPredicted RBP19.82■□□□□ 0.76
RTN1-202ENST00000342503 ETFBKMTQ8IXQ9 262 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 PBXIP1Q96AQ6 731 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 TNFRSF12AQ9NP84 129 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 IL36AQ9UHA7 158 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 DHRS7Q9Y394 339 aa19.82■□□□□ 0.76
RTN1-202ENST00000342503 KIF26AQ9ULI4 1882 aaPredicted RBP19.81■□□□□ 0.76
RTN1-202ENST00000342503 BTN3A1O00481 513 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 CTSLP07711 333 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 GFAPP14136 432 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 EPHA3P29320 983 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 KDSRQ06136 332 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 GALNT1Q10472 559 aaPredicted RBP19.81■□□□□ 0.76
RTN1-202ENST00000342503 GAB4Q2WGN9 574 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 GPR149Q86SP6 731 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 PARP9Q8IXQ6 854 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 NXPE1Q8N323 547 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 STON2Q8WXE9 905 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 FUBP1Q96AE4 644 aaKnown RBP19.81■□□□□ 0.76
RTN1-202ENST00000342503 CDYLQ9Y232 598 aa19.81■□□□□ 0.76
RTN1-202ENST00000342503 PRRC2BQ5JSZ5 2229 aaKnown RBP19.81■□□□□ 0.76
RTN1-202ENST00000342503 OTOL1A6NHN0 477 aaPredicted RBP19.8■□□□□ 0.76
RTN1-202ENST00000342503 LRRC14BA6NHZ5 514 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 AGAP14A8MT82 685 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 A8MUI8 341 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 SPECC1L-ADORA2AF8WAN1 911 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 UBFD1O14562 309 aaKnown RBP19.8■□□□□ 0.76
RTN1-202ENST00000342503 GYG2O15488 501 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 SIX3O95343 332 aaPredicted RBP19.8■□□□□ 0.76
RTN1-202ENST00000342503 ITGB6P18564 788 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 TSPAN8P19075 237 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 MESP2Q0VG99 397 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 RAB30Q15771 203 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 LSM12Q3MHD2 195 aaKnown RBP19.8■□□□□ 0.76
RTN1-202ENST00000342503 METTL21CQ5VZV1 264 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 ACAD11Q709F0 780 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 FBXO39Q8N4B4 442 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 ZNF366Q8N895 744 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 LKAAEAR1Q8TD35 194 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 NXPE3Q969Y0 559 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 TRMOQ9BU70 441 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 CCDC28BQ9BUN5 200 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 CADM1Q9BY67 442 aaKnown RBP19.8■□□□□ 0.76
RTN1-202ENST00000342503 ELOVL2Q9NXB9 296 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 TAS2R1Q9NYW7 299 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 GDE1Q9NZC3 331 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 FIS1Q9Y3D6 152 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 TRANK1O15050 2925 aa19.8■□□□□ 0.76
RTN1-202ENST00000342503 TSPAN11A1L157 253 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 SYCE1LA8MT33 242 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 B2RBV5 119 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 CYP2A6P11509 494 aaPredicted RBP19.79■□□□□ 0.76
RTN1-202ENST00000342503 TIMP2P16035 220 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 FCARP24071 287 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 HNRNPH1P31943 449 aaKnown RBP19.79■□□□□ 0.76
RTN1-202ENST00000342503 VIPR1P32241 457 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 SPINT3P49223 89 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 ST8SIA6P61647 398 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 CLDN19Q8N6F1 224 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 TEX9Q8N6V9 391 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 FAR2Q96K12 515 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 FAM83CQ9BQN1 747 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 SLC28A3Q9HAS3 691 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 KIAA1549LQ6ZVL6 1849 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 TRPC5OSA6NMA1 111 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 PRRT4C9JH25 899 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 GSC2O15499 205 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 LINC01565O15544 149 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 ARHGEF7Q14155 803 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 PHTF2Q8N3S3 785 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 AFAP1L2Q8N4X5 818 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 PLEKHG4BQ96PX9 1271 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 TRPV4Q9HBA0 871 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.79■□□□□ 0.76
RTN1-202ENST00000342503 OBP2AQ9NY56 170 aa19.79■□□□□ 0.76
RTN1-202ENST00000342503 MUC22E2RYF6 1773 aaPredicted RBP19.78■□□□□ 0.76
RTN1-202ENST00000342503 COL4A3Q01955 1670 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 SDHDO14521 159 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 DCXO43602 365 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 SKAP2O75563 359 aaPredicted RBP19.78■□□□□ 0.76
RTN1-202ENST00000342503 SLC25A14O95258 325 aaPredicted RBP19.78■□□□□ 0.76
RTN1-202ENST00000342503 TRIM16O95361 564 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 EEF1DP29692 281 aaKnown RBP19.78■□□□□ 0.76
RTN1-202ENST00000342503 CDH13P55290 713 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 BTKQ06187 659 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 ATP13A5Q4VNC0 1218 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 ZDHHC20Q5W0Z9 365 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 TANGO2Q6ICL3 276 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 MACC1Q6ZN28 852 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 FBXO27Q8NI29 283 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 PDLIM5Q96HC4 596 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms