RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NFYCQ13952 458 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 TBRG1Q3YBR2 411 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 KCTD20Q7Z5Y7 419 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 DEPDC4Q8N2C3 294 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 DNAAF3Q8N9W5 541 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 GALNT6Q8NCL4 622 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 IL31RAQ8NI17 732 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 PHOX2BQ99453 314 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 C6orf62Q9GZU0 229 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 PLSCR3Q9NRY6 295 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 FBXO40Q9UH90 709 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 FAM92AA1XBS5 289 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 TNNC2P02585 160 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 TCF3P15923 654 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 ARNTP27540 789 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 MTHFRP42898 656 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 GHRHRQ02643 423 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 INCA1Q0VD86 236 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 FSCN1Q16658 493 aaKnown RBP18.39■□□□□ 0.53
SMPD1-201ENST00000342245 IFNEQ86WN2 208 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 PLCZ1Q86YW0 608 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 FBXL6Q8N531 539 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 TMEM176AQ96HP8 235 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 OMDQ99983 421 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 UGT2B28Q9BY64 529 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 NARFLQ9H6Q4 476 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 GABBR1Q9UBS5 961 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 A0A1W2PP18 115 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.53
SMPD1-201ENST00000342245 KRT87PA6NCN2 255 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 DFNA5O60443 496 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 SEMA3DO95025 777 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 STBD1O95210 358 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 NCK1P16333 377 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 CHRM3P20309 590 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 ERP29P30040 261 aaKnown RBP18.39■□□□□ 0.53
SMPD1-201ENST00000342245 BLOC1S3Q6QNY0 202 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 RBM23Q86U06 439 aaKnown RBP18.39■□□□□ 0.53
SMPD1-201ENST00000342245 SLC41A1Q8IVJ1 513 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 BLOC1S5Q8TDH9 187 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 HSFY1Q96LI6 401 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 TTYH2Q9BSA4 534 aa18.39■□□□□ 0.53
SMPD1-201ENST00000342245 GBA2Q9HCG7 927 aaPredicted RBP18.39■□□□□ 0.53
SMPD1-201ENST00000342245 OAS3Q9Y6K5 1087 aaKnown RBP18.39■□□□□ 0.53
SMPD1-201ENST00000342245 LTBP1Q14766 1721 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 UGT2B17O75795 530 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 CD36P16671 472 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 AVPR1AP37288 418 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 PTGER2P43116 358 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SLC9A3P48764 834 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 UGT2B15P54855 530 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SNX16P57768 344 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SLC35A2P78381 396 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 GRIK2Q13002 908 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 UGT3A2Q3SY77 523 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 PYCR3Q53H96 274 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 ZNF667Q5HYK9 610 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SPANXN2Q5MJ10 180 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 ZPBP2Q6X784 338 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SPATC1Q76KD6 591 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 FCGR1BQ92637 280 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SMOC2Q9H3U7 446 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 AS3MTQ9HBK9 375 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SDR39U1Q9NRG7 319 aaPredicted RBP18.38■□□□□ 0.53
SMPD1-201ENST00000342245 COMMD8Q9NX08 183 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 ERVK-18Q9QC07 812 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 PCDHGB2Q9Y5G2 931 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 A0A0X1KG70 313 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 DDTLA6NHG4 134 aaPredicted RBP18.38■□□□□ 0.53
SMPD1-201ENST00000342245 GH2P01242 217 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 PGK2P07205 417 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 ARL4AP40617 200 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 TFAMQ00059 246 aaKnown RBP18.38■□□□□ 0.53
SMPD1-201ENST00000342245 RPS6KA2Q15349 733 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SULT1C3Q6IMI6 304 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 DENND5AQ6IQ26 1287 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 KBTBD8Q8NFY9 601 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 ZFAND1Q8TCF1 268 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 SLC38A4Q969I6 547 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 LGMNQ99538 433 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 ACAT2Q9BWD1 397 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 AKTIPQ9H8T0 292 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 POLHQ9Y253 713 aa18.38■□□□□ 0.53
SMPD1-201ENST00000342245 MT-ND1P03886 318 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 RBP1P09455 135 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ITGAMP11215 1152 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 HRH2P25021 359 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 SLC15A1P46059 708 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 MRPL19P49406 292 aaKnown RBP18.37■□□□□ 0.53
SMPD1-201ENST00000342245 PARP15Q460N3 678 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 VARS2Q5ST30 1063 aaKnown RBP18.37■□□□□ 0.53
SMPD1-201ENST00000342245 GLYATQ6IB77 296 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 CES5AQ6NT32 575 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 MICU2Q8IYU8 434 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ZNF567Q8N184 647 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 NAT16Q8N8M0 369 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms