RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PBLDP30039 288 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 RAD51Q06609 339 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 UGP2Q16851 508 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 FUT11Q495W5 492 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SLC9B1Q4ZJI4 515 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ZNF362Q5T0B9 420 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 PGM2L1Q6PCE3 622 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 AAGABQ6PD74 315 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 PIANPQ8IYJ0 282 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 OLFM1Q99784 485 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 RHOJQ9H4E5 214 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 COL6A3P12111 3177 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 WASH4PA8MWX3 477 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 INPP4BO15327 924 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 CHRNGP07510 517 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 PABPC4LP0CB38 370 aaKnown RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 FSHRP23945 695 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 HOXD11P31277 338 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ADRA1AP35348 466 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ECT2LQ008S8 904 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 CREB5Q02930 508 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SEMA3AQ14563 771 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 INSCQ1MX18 579 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 HABP4Q5JVS0 413 aaKnown RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ZNF648Q5T619 568 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SERPINA13PQ6UXR4 307 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 OR6Y1Q8NGX8 325 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 MAPK15Q8TD08 544 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ACTRT2Q8TDY3 377 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 TDRD1Q9BXT4 1180 aaKnown RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 LATS2Q9NRM7 1088 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ITM2BQ9Y287 266 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 TMED5Q9Y3A6 229 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SUPT7LO94864 414 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 PEX2P28328 305 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 DGKGP49619 791 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 DCTN2Q13561 401 aaKnown RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 ARHGEF7Q14155 803 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 AFMIDQ63HM1 303 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 FSTL5Q8N475 847 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 BRSK1Q8TDC3 778 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 SCAMP4Q969E2 229 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 CMTM5Q96DZ9 223 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 RPP25Q9BUL9 199 aaKnown RBP12.97□□□□□ -0.33
COL18A1-201ENST00000342220 POMPQ9Y244 141 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 TBC1D30Q9Y2I9 924 aa12.97□□□□□ -0.33
COL18A1-201ENST00000342220 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-201ENST00000342220 HEPACAM2A8MVW5 462 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 LDB2O43679 373 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 GSTT2P0CG29 244 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 GSTT2BP0CG30 244 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 CDK4P11802 303 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 TFEBP19484 476 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 SERPINA4P29622 427 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 RAB10P61026 200 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 NAB1Q13506 487 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 DHCR24Q15392 516 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 FAM78AQ5JUQ0 283 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 C6orf183Q5T699 404 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 SLC2A7Q6PXP3 512 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 PDSS2Q86YH6 399 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 FLCNQ8NFG4 579 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 HEXDCQ8WVB3 486 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 ATP13A3Q9H7F0 1226 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 ZFYVE1Q9HBF4 777 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 CACNA2D2Q9NY47 1150 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 MOSPD1Q9UJG1 213 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
COL18A1-201ENST00000342220 EIF3FO00303 357 aaPredicted RBP12.96□□□□□ -0.34
COL18A1-201ENST00000342220 PRAMEF1O95521 474 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 SRCP12931 536 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 GRIA2P42262 883 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 AQP4P55087 323 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.34
COL18A1-201ENST00000342220 TBL3Q12788 808 aaKnown RBP12.96□□□□□ -0.34
COL18A1-201ENST00000342220 SLC12A1Q13621 1099 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 TANGO2Q6ICL3 276 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 C12orf40Q86WS4 652 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 MFSD6LQ8IWD5 586 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 GABPB2Q8TAK5 448 aaPredicted RBP12.96□□□□□ -0.34
COL18A1-201ENST00000342220 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.34
COL18A1-201ENST00000342220 KLK6Q92876 244 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 DOLKQ9UPQ8 538 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.34
COL18A1-201ENST00000342220 ATP6AP2A0A1C7CYW4 349 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 OTOL1A6NHN0 477 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 SUPT3HB4E1H0 165 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 AP3B1O00203 1094 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ZNF197O14709 1029 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ATP6AP2O75787 350 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms