RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PRSS56P0CW18 603 aa14.59□□□□□ -0.07
RET-201ENST00000340058 CCL5P13501 91 aa14.59□□□□□ -0.07
RET-201ENST00000340058 ATP6V1C1P21283 382 aa14.59□□□□□ -0.07
RET-201ENST00000340058 SLC18A2Q05940 514 aa14.59□□□□□ -0.07
RET-201ENST00000340058 DYNC1I2Q13409 638 aaKnown RBP14.59□□□□□ -0.07
RET-201ENST00000340058 TMEM26Q6ZUK4 368 aa14.59□□□□□ -0.07
RET-201ENST00000340058 MTSS1LQ765P7 747 aa14.59□□□□□ -0.07
RET-201ENST00000340058 H3BN98 237 aa14.58□□□□□ -0.07
RET-201ENST00000340058 VPS4BO75351 444 aa14.58□□□□□ -0.07
RET-201ENST00000340058 ZBTB11O95625 1053 aaPredicted RBP14.58□□□□□ -0.07
RET-201ENST00000340058 DDX5P17844 614 aaKnown RBP14.58□□□□□ -0.07
RET-201ENST00000340058 TP53BP2Q13625 1128 aa14.58□□□□□ -0.07
RET-201ENST00000340058 TJAP1Q5JTD0 557 aa14.58□□□□□ -0.07
RET-201ENST00000340058 C6orf52Q5T4I8 152 aa14.58□□□□□ -0.07
RET-201ENST00000340058 PRMT9Q6P2P2 845 aa14.58□□□□□ -0.07
RET-201ENST00000340058 CNTD1Q8N815 330 aa14.58□□□□□ -0.07
RET-201ENST00000340058 ZMIZ2Q8NF64 920 aa14.58□□□□□ -0.07
RET-201ENST00000340058 BPIFB6Q8NFQ5 453 aa14.58□□□□□ -0.07
RET-201ENST00000340058 PTCD2Q8WV60 388 aaKnown RBP14.58□□□□□ -0.07
RET-201ENST00000340058 GLMNQ92990 594 aa14.58□□□□□ -0.07
RET-201ENST00000340058 EBF2Q9HAK2 575 aa14.58□□□□□ -0.07
RET-201ENST00000340058 OXSMQ9NWU1 459 aa14.58□□□□□ -0.07
RET-201ENST00000340058 RHBDL2Q9NX52 303 aa14.58□□□□□ -0.07
RET-201ENST00000340058 PLCH1Q4KWH8 1693 aa14.58□□□□□ -0.08
RET-201ENST00000340058 SMCHD1A6NHR9 2005 aa14.58□□□□□ -0.08
RET-201ENST00000340058 LRRC14BA6NHZ5 514 aa14.58□□□□□ -0.08
RET-201ENST00000340058 AURKAO14965 403 aa14.58□□□□□ -0.08
RET-201ENST00000340058 IDO1P14902 403 aa14.58□□□□□ -0.08
RET-201ENST00000340058 CES5AQ6NT32 575 aa14.58□□□□□ -0.08
RET-201ENST00000340058 PSRC1Q6PGN9 363 aaPredicted RBP14.58□□□□□ -0.08
RET-201ENST00000340058 C6orf89Q6UWU4 347 aa14.58□□□□□ -0.08
RET-201ENST00000340058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.58□□□□□ -0.08
RET-201ENST00000340058 EID3Q8N140 333 aa14.58□□□□□ -0.08
RET-201ENST00000340058 CPSF7Q8N684 471 aaKnown RBP14.58□□□□□ -0.08
RET-201ENST00000340058 ZNF461Q8TAF7 563 aa14.58□□□□□ -0.08
RET-201ENST00000340058 CCDC3Q9BQI4 270 aa14.58□□□□□ -0.08
RET-201ENST00000340058 ARID1BQ8NFD5 2236 aaPredicted RBP14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3DA0A087WVF3 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3IA0A087WXS9 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3EA0A087X179 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3KA0A087X1G2 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3FA6NER0 549 aaPredicted RBP14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3LB9A6J9 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 DCLK1O15075 740 aa14.58□□□□□ -0.08
RET-201ENST00000340058 GRM6O15303 877 aa14.58□□□□□ -0.08
RET-201ENST00000340058 INPPL1O15357 1258 aa14.58□□□□□ -0.08
RET-201ENST00000340058 SLC10A3P09131 477 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3HP0C7X1 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 IL4RP24394 825 aa14.58□□□□□ -0.08
RET-201ENST00000340058 ARSDP51689 593 aa14.58□□□□□ -0.08
RET-201ENST00000340058 PCLAFQ15004 111 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3GQ6DHY5 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3CQ6IPX1 549 aa14.58□□□□□ -0.08
RET-201ENST00000340058 TBC1D3Q8IZP1 549 aaPredicted RBP14.58□□□□□ -0.08
RET-201ENST00000340058 STN1Q9H668 368 aaKnown RBP14.58□□□□□ -0.08
RET-201ENST00000340058 C2orf78A6NCI8 922 aa14.57□□□□□ -0.08
RET-201ENST00000340058 K7ERQ8 282 aa14.57□□□□□ -0.08
RET-201ENST00000340058 COCHO43405 550 aa14.57□□□□□ -0.08
RET-201ENST00000340058 ALDH1A2O94788 518 aa14.57□□□□□ -0.08
RET-201ENST00000340058 XRCC1P18887 633 aaPredicted RBP14.57□□□□□ -0.08
RET-201ENST00000340058 PSMD8P48556 350 aa14.57□□□□□ -0.08
RET-201ENST00000340058 CACNG1Q06432 222 aa14.57□□□□□ -0.08
RET-201ENST00000340058 CHRNA6Q15825 494 aa14.57□□□□□ -0.08
RET-201ENST00000340058 PIK3R6Q5UE93 754 aa14.57□□□□□ -0.08
RET-201ENST00000340058 FAM9CQ8IZT9 166 aa14.57□□□□□ -0.08
RET-201ENST00000340058 ZBTB2Q8N680 514 aa14.57□□□□□ -0.08
RET-201ENST00000340058 FAM47BQ8NA70 645 aa14.57□□□□□ -0.08
RET-201ENST00000340058 MPP4Q96JB8 637 aa14.57□□□□□ -0.08
RET-201ENST00000340058 MARCH4Q9P2E8 410 aaPredicted RBP14.57□□□□□ -0.08
RET-201ENST00000340058 MYRFQ9Y2G1 1151 aa14.57□□□□□ -0.08
RET-201ENST00000340058 A0A0G2JN53 185 aa14.57□□□□□ -0.08
RET-201ENST00000340058 MBLAC1A4D2B0 266 aaPredicted RBP14.57□□□□□ -0.08
RET-201ENST00000340058 H3BM21 787 aa14.57□□□□□ -0.08
RET-201ENST00000340058 SLC31A1O15431 190 aa14.57□□□□□ -0.08
RET-201ENST00000340058 FCGR1AP12314 374 aa14.57□□□□□ -0.08
RET-201ENST00000340058 HCAR3P49019 387 aa14.57□□□□□ -0.08
RET-201ENST00000340058 STK19P49842 368 aaPredicted RBP14.57□□□□□ -0.08
RET-201ENST00000340058 C10orf53Q8N6V4 93 aa14.57□□□□□ -0.08
RET-201ENST00000340058 UBR7Q8N806 425 aa14.57□□□□□ -0.08
RET-201ENST00000340058 CSGALNACT1Q8TDX6 532 aa14.57□□□□□ -0.08
RET-201ENST00000340058 CLIP3Q96DZ5 547 aa14.57□□□□□ -0.08
RET-201ENST00000340058 SLC28A3Q9HAS3 691 aa14.57□□□□□ -0.08
RET-201ENST00000340058 C6orf203Q9P0P8 240 aaPredicted RBP14.57□□□□□ -0.08
RET-201ENST00000340058 FETUBQ9UGM5 382 aa14.57□□□□□ -0.08
RET-201ENST00000340058 PGAP2Q9UHJ9 254 aa14.57□□□□□ -0.08
RET-201ENST00000340058 ARIH1Q9Y4X5 557 aaPredicted RBP14.57□□□□□ -0.08
RET-201ENST00000340058 TLL2Q9Y6L7 1015 aa14.57□□□□□ -0.08
RET-201ENST00000340058 C4AP0C0L4 1744 aa14.57□□□□□ -0.08
RET-201ENST00000340058 TNRC6CQ9HCJ0 1690 aaKnown RBP14.57□□□□□ -0.08
RET-201ENST00000340058 ISM1B1AKI9 464 aa14.57□□□□□ -0.08
RET-201ENST00000340058 OR1I1O60431 355 aa14.57□□□□□ -0.08
RET-201ENST00000340058 ZNF623O75123 536 aa14.57□□□□□ -0.08
RET-201ENST00000340058 RNASEH2AO75792 299 aaKnown RBP14.57□□□□□ -0.08
RET-201ENST00000340058 TNFAIP8O95379 198 aa14.57□□□□□ -0.08
RET-201ENST00000340058 GNPDA1P46926 289 aa14.57□□□□□ -0.08
RET-201ENST00000340058 RNF220Q5VTB9 566 aa14.57□□□□□ -0.08
RET-201ENST00000340058 EEF1AKMT1Q8WVE0 214 aa14.57□□□□□ -0.08
RET-201ENST00000340058 ASZ1Q8WWH4 475 aa14.57□□□□□ -0.08
RET-201ENST00000340058 MYH9P35579 1960 aaKnown RBP14.57□□□□□ -0.08
RET-201ENST00000340058 CKMT2P17540 419 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms