RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 MOXD2PA6NHM9 499 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 ZNF99A8MXY4 864 aaPredicted RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 H0Y858 1186 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 AURKAO14965 403 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 DCLK1O15075 740 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 CCNKO75909 580 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 DARSP14868 501 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 FMO3P31513 532 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 DPP6P42658 865 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 DGKQP52824 942 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 EEFSECP57772 596 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 REXO5Q96IC2 774 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 PPP3R2Q96LZ3 170 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 EIF2B4Q9UI10 523 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 LRRC14BA6NHZ5 514 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 ACOT8O14734 319 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 IRF1P10914 325 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 PRKACGP22612 351 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 GGT5P36269 586 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 CD97P48960 835 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 HLCSP50747 726 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 GHRHRQ02643 423 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 NECAB2Q7Z6G3 386 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 CARM1Q86X55 608 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 LRRC49Q8IUZ0 686 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 ZYG11BQ9C0D3 744 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 ADAMTS10Q9H324 1103 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 DUSP12Q9UNI6 340 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 GPR182O15218 404 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 RGS10O43665 173 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 SH3BGRLO75368 114 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 BEST1O76090 585 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 RASAL1O95294 804 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 CAPN1P07384 714 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 CRY1Q16526 586 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 DCDC5Q6ZRR9 648 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 HID1Q8IV36 788 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 OR4K2Q8NGD2 314 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 NSUN5Q96P11 429 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 NPLQ9BXD5 320 aaPredicted RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 MEAF6Q9HAF1 191 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 NMRK2Q9NPI5 230 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 TRMT13Q9NUP7 481 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 GALPQ9UBC7 116 aa12.37□□□□□ -0.43
RIOK3-201ENST00000339486 TNPO3Q9Y5L0 923 aaKnown RBP12.37□□□□□ -0.43
RIOK3-201ENST00000339486 NTRK1P04629 796 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 CNPP09543 421 aaKnown RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 UROSP10746 265 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 CDH1P12830 882 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 RFC2P35250 354 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 BRCC3P46736 316 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 PRIM2P49643 509 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 LRP8Q14114 963 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 CPSF6Q16630 551 aaKnown RBP eCLIP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 BRMS1LQ5PSV4 323 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ZNF678Q5SXM1 525 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 SPOUT1Q5T280 376 aaKnown RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 C2CD4AQ8NCU7 369 aaPredicted RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 CDK15Q96Q40 435 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TEKT2Q9UIF3 430 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 KCTD3Q9Y597 815 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 IGKV6D-21A0A0A0MT36 114 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ZNF195O14628 629 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 LRATO95237 230 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 XPAP23025 273 aaPredicted RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 CD68P34810 354 aaPredicted RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ALDH3A2P51648 485 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TMBIM6P55061 237 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ILF2Q12905 390 aaKnown RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 APOFQ13790 326 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TTLL9Q3SXZ7 439 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 RBM48Q5RL73 367 aaKnown RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TXNDC11Q6PKC3 985 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TRUB1Q8WWH5 349 aaKnown RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 POLE4Q9NR33 117 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 KRT84Q9NSB2 600 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 DNAJB9Q9UBS3 223 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 E9PAM4 449 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 PLSCR1O15162 318 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 CDK14O94921 469 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 PGLSO95336 258 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 UGT2B4P06133 528 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 SMIM10L2AP0DMW4 78 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 SMIM10L2BP0DMW5 78 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 KCNA5P22460 613 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ZNF177Q13360 481 aaPredicted RBP12.36□□□□□ -0.43
RIOK3-201ENST00000339486 SYT16Q17RD7 645 aa12.36□□□□□ -0.43
RIOK3-201ENST00000339486 ZCCHC8Q6NZY4 707 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 342.2 ms