RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DET1Q7L5Y6 550 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 FGF13Q92913 245 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 KIAA1191Q96A73 305 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 ECHDC3Q96DC8 303 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM161BQ96MY7 647 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 CDK15Q96Q40 435 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 TCF12Q99081 682 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 DERL2Q9GZP9 239 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 DUS2Q9NX74 493 aaKnown RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 B4GALT6Q9UBX8 382 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 ERVW-1Q9UQF0 538 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 TRAF6Q9Y4K3 522 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 DNAJC15Q9Y5T4 150 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 GLYATL1P3A0A0U1RQE8 302 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 C9JVG2 144 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 SPECC1L-ADORA2AF8WAN1 911 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 PRMT5O14744 637 aaPredicted RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 LINC01565O15544 149 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 PEX11AO75192 247 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 PDE5AO76074 875 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC25A14O95258 325 aaPredicted RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 GUCA1CO95843 209 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 TPBGLP0DKB5 382 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 PTGER3P43115 390 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 MAGEA10P43363 369 aaPredicted RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 MNAT1P51948 309 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 UBE3AQ05086 875 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 RAD51Q06609 339 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC20A2Q08357 652 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 OR9I1Q8NGQ6 314 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 HMGCLL1Q8TB92 370 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 MCUR1Q96AQ8 359 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 HBEGFQ99075 208 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 TUBB1Q9H4B7 451 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 MID1IP1Q9NPA3 183 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 HACD3Q9P035 362 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 TRMT6Q9UJA5 497 aaKnown RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 ADAMTS6Q9UKP5 1117 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 ITM2BQ9Y287 266 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 BTRCQ9Y297 605 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 WASF2Q9Y6W5 498 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 GBF1Q92538 1859 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 A0A088AWK7 358 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 AIM2O14862 343 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SOCS5O75159 536 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TULP3O75386 442 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 VPS26AO75436 327 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC34A2O95436 690 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 POP4O95707 220 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 C1SP09871 688 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CISD3P0C7P0 127 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 COX4I1P13073 169 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 POLR2EP19388 210 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 HOXA9P31269 272 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC26A3P40879 764 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 GDF5P43026 501 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CSNK1DP48730 415 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 NME5P56597 212 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 IL2P60568 153 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 NAA25Q14CX7 972 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TCHHL1Q5QJ38 904 aaPredicted RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 RARS2Q5T160 578 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 PTRHD1Q6GMV3 140 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 MBOAT1Q6ZNC8 495 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TPRG1Q6ZUI0 275 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 Q6ZVL8 140 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 HSD11B1LQ7Z5J1 315 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SNX20Q7Z614 316 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TMPRSS6Q8IU80 811 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 NPAS3Q8IXF0 933 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 PELI3Q8N2H9 469 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 STAG3L4Q8TBR4 150 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 KCNJ9Q92806 393 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 RAB3IPQ96QF0 476 aaPredicted RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 ACOX2Q99424 681 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SIKE1Q9BRV8 207 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TFB2MQ9H5Q4 396 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM8A1Q9UBU6 413 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC7A8Q9UHI5 535 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC25A13Q9UJS0 675 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CDYLQ9Y232 598 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 COPG1Q9Y678 874 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 STX16-NPEPL1H3BU86 382 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 KERAO60938 352 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SMIM24O75264 130 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 HNRNPA1P09651 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 DDX6P26196 483 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 ACRV1P26436 265 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 PIK3R1P27986 724 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 ETV3P41162 512 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 KPNA2P52292 529 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 RIPK1Q13546 671 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 GRIN2CQ14957 1233 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TGFBIQ15582 683 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 PHKG1Q16816 387 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 GAB4Q2WGN9 574 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 ELMSAN1Q6PJG2 1045 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms