RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SEPT6Q14141 434 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 UBAP2LQ14157 1087 aaKnown RBP15.44■□□□□ 0.06
LINC01116-202ENST00000339037 DPYSL3Q14195 570 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 PAFAH1B3Q15102 231 aaKnown RBP15.44■□□□□ 0.06
LINC01116-202ENST00000339037 IGFBP7Q16270 282 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 CRTC2Q53ET0 693 aaPredicted RBP15.44■□□□□ 0.06
LINC01116-202ENST00000339037 ARRDC2Q8TBH0 407 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 FAM71BQ8TC56 605 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 CPLX3Q8WVH0 158 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 ABHD17AQ96GS6 310 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 TSGA13Q96PP4 275 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 WDR24Q96S15 920 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 TBC1D10AQ9BXI6 508 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 ULBP3Q9BZM4 244 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 CARD9Q9H257 536 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 PRDM8Q9NQV8 689 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 SIDT1Q9NXL6 827 aaKnown RBP15.44■□□□□ 0.06
LINC01116-202ENST00000339037 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 A0A087X0T9 212 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 MYO1FO00160 1098 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 NUAK1O60285 661 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 FAM228BP0C875 321 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 MX2P20592 715 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 GJC1P36383 396 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 GFERP55789 205 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 UBE2IP63279 158 aaKnown RBP15.43■□□□□ 0.06
LINC01116-202ENST00000339037 TPM4P67936 248 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 FOXM1Q08050 763 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 HADHQ16836 314 aaKnown RBP15.43■□□□□ 0.06
LINC01116-202ENST00000339037 LACTB2Q53H82 288 aaPredicted RBP15.43■□□□□ 0.06
LINC01116-202ENST00000339037 ATP1A1-AS1Q5TC04 95 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 C16orf46Q6P387 395 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
LINC01116-202ENST00000339037 ZNF670Q9BS34 389 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 MLPHQ9BV36 600 aaPredicted RBP15.43■□□□□ 0.06
LINC01116-202ENST00000339037 OSGEPL1Q9H4B0 414 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 ATXN10Q9UBB4 475 aa15.43■□□□□ 0.06
LINC01116-202ENST00000339037 BZW2Q9Y6E2 419 aaKnown RBP15.43■□□□□ 0.06
LINC01116-202ENST00000339037 UNC79Q9P2D8 2635 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 PRR19A6NJB7 356 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ANKRD66B4E2M5 251 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 GPR89AB7ZAQ6 455 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 MTA2O94776 668 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 GYPCP04921 128 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 SERPING1P05155 500 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 CYP1A2P05177 515 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 GPR89BP0CG08 455 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ZNF8P17098 575 aaPredicted RBP15.42■□□□□ 0.06
LINC01116-202ENST00000339037 CD86P42081 329 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ARSEP51690 589 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ZBED6P86452 979 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 GBE1Q04446 702 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 MAP7Q14244 749 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 QPCTQ16769 361 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ZNF569Q5MCW4 686 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 KCTD6Q8NC69 237 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 C9orf72Q96LT7 481 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 PLEKHG4BQ96PX9 1271 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ADGRE3Q9BY15 652 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 OR2AG1Q9H205 316 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 UCK1Q9HA47 277 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 KLC4Q9NSK0 619 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 IFNKQ9P0W0 207 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 CAPN11Q9UMQ6 739 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 KCTD3Q9Y597 815 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 PCDHB3Q9Y5E6 796 aa15.42■□□□□ 0.06
LINC01116-202ENST00000339037 MRPS18BQ9Y676 258 aaKnown RBP15.42■□□□□ 0.06
LINC01116-202ENST00000339037 NBPF19A0A087WUL8 3843 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 GOLGA6L19H0YKK7 550 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 UBXN7O94888 489 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 VIPP01282 170 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 C9P02748 559 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 CD46P15529 392 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 TYRP1P17643 537 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 DLSTP36957 453 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 CLCNKAP51800 687 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 PDK2Q15119 407 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 ATP13A4Q4VNC1 1196 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 CRTC3Q6UUV7 619 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 TMEM26Q6ZUK4 368 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 MAP7D3Q8IWC1 876 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 TRIM48Q8IWZ4 208 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 CCNYQ8ND76 341 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 LRRN4Q8WUT4 740 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 HDAC11Q96DB2 347 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 TGM7Q96PF1 710 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 ZSCAN5AQ9BUG6 496 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 SPATA16Q9BXB7 569 aa15.41■□□□□ 0.06
LINC01116-202ENST00000339037 CENPEQ02224 2701 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 KCNK1O00180 336 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 TOX3O15405 576 aaPredicted RBP15.4■□□□□ 0.06
LINC01116-202ENST00000339037 RASSF9O75901 435 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 SLC25A14O95258 325 aaPredicted RBP15.4■□□□□ 0.06
LINC01116-202ENST00000339037 JCHAINP01591 159 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 NTRK1P04629 796 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 MMP2P08253 660 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 ZNF28P17035 718 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 AMD1P17707 334 aa15.4■□□□□ 0.06
LINC01116-202ENST00000339037 XRCC1P18887 633 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms