RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SCARF2Q96GP6 870 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF514Q96K75 400 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 RHOXF2Q9BQY4 288 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 OR2AG1Q9H205 316 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 CARS2Q9HA77 564 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 IL21RQ9HBE5 538 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 FGF22Q9HCT0 170 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ARFGAP3Q9NP61 516 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ZDHHC3Q9NYG2 299 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ATXN10Q9UBB4 475 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ZC3H7BQ9UGR2 993 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 TMPRSS11EQ9UL52 423 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 GPSM3Q9Y4H4 160 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 PCDHGB2Q9Y5G2 931 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 CSNK1G3Q9Y6M4 447 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 FAM169AQ9Y6X4 670 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 TRBV5-4A0A0C4DH59 114 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 E7ESA3 106 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 F8W8V4 182 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 TP73O15350 636 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 CD3EAPO15446 510 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 GRID2O43424 1007 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 NUAK1O60285 661 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 PCDHGA12O60330 932 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 PMLP29590 882 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 AKT1P31749 480 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 FOXN2P32314 431 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 GNPDA1P46926 289 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 BNIP3Q12983 259 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 CUL1Q13616 776 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 LONRF1Q17RB8 773 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 INAVAQ3KP66 663 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 PRRT3Q5FWE3 981 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 HP1BP3Q5SSJ5 553 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF648Q5T619 568 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 STPG1Q5TH74 334 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 NEPROQ6NW34 567 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 ZDHHC24Q6UX98 284 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 ALYREFQ86V81 257 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 LMNTD2Q8IXW0 634 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 OTUD6BQ8N6M0 293 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 OR2I1PQ8NGU4 316 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 FBXO25Q8TCJ0 367 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 CALML6Q8TD86 181 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 LMX1AQ8TE12 382 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 SCG3Q8WXD2 468 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 FCRL3Q96P31 734 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 TCF12Q99081 682 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 PHACTR1Q9C0D0 580 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 SAYSD1Q9NPB0 183 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 MRPL40Q9NQ50 206 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 CATSPERZQ9NTU4 200 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 C20orf96Q9NUD7 363 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 TRNAU1APQ9NX07 287 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 APOBEC3BQ9UH17 382 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 KLF15Q9UIH9 416 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 SUFUQ9UMX1 484 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 TEX264Q9Y6I9 313 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 DNMT3AQ9Y6K1 912 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 OAS3Q9Y6K5 1087 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
SPTLC1-202ENST00000337841 OR51F1A6NGY5 319 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 BHMG1C9JSJ3 638 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 KMOO15229 486 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 AQP9O43315 295 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 GDF9O60383 454 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 KCNJ13O60928 360 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 MTX2O75431 263 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 NDUFS3O75489 264 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 PIAS2O75928 621 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ANXA6P08133 673 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ALPPL2P10696 532 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ATP1B2P14415 290 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ZNF8P17098 575 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 SDHBP21912 280 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 DGKAP23743 735 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ACRV1P26436 265 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 EPHA8P29322 1005 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 TTPAP49638 278 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 CDKN1CP49918 316 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 LIMK1P53667 647 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ILF3Q12906 894 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 C1orf61Q13536 156 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ITIH4Q14624 930 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 SHBQ15464 509 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 PYCR3Q53H96 274 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 TMEM220Q6QAJ8 160 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 TAF8Q7Z7C8 310 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 CCDC25Q86WR0 208 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 GKN2Q86XP6 184 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ANKMY2Q8IV38 441 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 IGDCC3Q8IVU1 814 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms