RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 NDUFAB1O14561 156 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 BIRC5O15392 142 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 RECQL5O94762 991 aaPredicted RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 DNTTP04053 509 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 CPA3P15088 417 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 CCINQ13939 588 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 AGBL4Q5VU57 503 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 PAQR3Q6TCH7 311 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 FAM47EQ6ZV65 393 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 CCDC91Q7Z6B0 441 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 SIDT2Q8NBJ9 832 aaKnown RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 DTD2Q96FN9 168 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 FGFR1OP2Q9NVK5 253 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 COPG2Q9UBF2 871 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 TRMT6Q9UJA5 497 aaKnown RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 GNPTGQ9UJJ9 305 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 TMPRSS11EQ9UL52 423 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 CA14Q9ULX7 337 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 TK2O00142 265 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 PCDH8O95206 1070 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 WISP3O95389 354 aaPredicted RBP14.55□□□□□ -0.08
CBX3-201ENST00000337620 FAM107AO95990 144 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 APOA4P06727 396 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 ZNF37AP17032 561 aaPredicted RBP14.55□□□□□ -0.08
CBX3-201ENST00000337620 ITGB6P18564 788 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 DRD4P21917 467 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 RPS3P23396 243 aaKnown RBP eCLIP14.55□□□□□ -0.085e-7■□□□□ 8.4
CBX3-201ENST00000337620 ALDH3A1P30838 453 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 AKT1P31749 480 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 NSG1P42857 185 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 KPNA2P52292 529 aaKnown RBP14.55□□□□□ -0.08
CBX3-201ENST00000337620 CCDC15Q0P6D6 951 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 ITIH4Q14624 930 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 PCLAFQ15004 111 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 MLF2Q15773 248 aaPredicted RBP14.55□□□□□ -0.08
CBX3-201ENST00000337620 CHI3L2Q15782 390 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 SETMARQ53H47 684 aaPredicted RBP14.55□□□□□ -0.08
CBX3-201ENST00000337620 GPRC6AQ5T6X5 926 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 KLC3Q6P597 504 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 C10orf107Q8IVU9 208 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 PPP1R14CQ8TAE6 165 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 KCNJ9Q92806 393 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 SLC30A3Q99726 388 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 SYTL2Q9HCH5 934 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 FBXL12Q9NXK8 326 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 NFKBIL1Q9UBC1 381 aaPredicted RBP14.55□□□□□ -0.08
CBX3-201ENST00000337620 XPR1Q9UBH6 696 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 DUSP12Q9UNI6 340 aa14.55□□□□□ -0.08
CBX3-201ENST00000337620 FADS2P1A8MWK0 482 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 MAN2B1O00754 1011 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 MTX2O75431 263 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 TRIM16O95361 564 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 SLC26A3P40879 764 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 SKIV2L2P42285 1042 aaKnown RBP14.54□□□□□ -0.08
CBX3-201ENST00000337620 TAS2R38P59533 333 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 SF3A3Q12874 501 aaKnown RBP eCLIP14.54□□□□□ -0.08
CBX3-201ENST00000337620 RGS9BPQ6ZS82 235 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 NUS1Q96E22 293 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 DCUN1D1Q96GG9 259 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 PITPNM3Q9BZ71 974 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 FBRSQ9HAH7 460 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 SLCO1B3Q9NPD5 702 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 SIRPGQ9P1W8 387 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 OAS3Q9Y6K5 1087 aaKnown RBP14.54□□□□□ -0.08
CBX3-201ENST00000337620 MYL2P10916 166 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 B4GALNT1Q00973 533 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 ACAP2Q15057 778 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 EOGTQ5NDL2 527 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 UGT3A1Q6NUS8 523 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 ZNF852Q6ZMS4 543 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 ZCCHC23Q6ZST2 131 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 DET1Q7L5Y6 550 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 CYP2U1Q7Z449 544 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 TRIM42Q8IWZ5 723 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 TMEM151AQ8N4L1 468 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 DTX3LQ8TDB6 740 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 ZNF473Q8WTR7 871 aaKnown RBP14.54□□□□□ -0.08
CBX3-201ENST00000337620 SGF29Q96ES7 293 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 MRPL57Q9BQC6 102 aaKnown RBP14.54□□□□□ -0.08
CBX3-201ENST00000337620 MRPL46Q9H2W6 279 aaKnown RBP14.54□□□□□ -0.08
CBX3-201ENST00000337620 SMOXQ9NWM0 555 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 COL6A3P12111 3177 aa14.54□□□□□ -0.08
CBX3-201ENST00000337620 IGLON5A6NGN9 336 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 G3V2L1 256 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 H3BMM5 538 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 INPP4BO15327 924 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 TSPAN6O43657 245 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 AP1G1O43747 822 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 SLC25A14O95258 325 aaPredicted RBP14.53□□□□□ -0.08
CBX3-201ENST00000337620 SBK3P0C264 359 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 TFEBP19484 476 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CD9P21926 228 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CLCN7P51798 805 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 TMEM92Q6UXU6 159 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 MACC1Q6ZN28 852 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 RAVER1Q8IY67 606 aaKnown RBP14.53□□□□□ -0.08
CBX3-201ENST00000337620 GIMAP7Q8NHV1 300 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CD200R1Q8TD46 325 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 SIPA1Q96FS4 1042 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 NSRP1Q9H0G5 558 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms