RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 B4GAT1O43505 415 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 VEGFDO43915 354 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
MRPL55-203ENST00000336520 CDK14O94921 469 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 CPNE6O95741 557 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 LPOP22079 712 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-203ENST00000336520 CCKBRP32239 447 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ADRA1AP35348 466 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 EIF2S3P41091 472 aaKnown RBP11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ABCG1P45844 678 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 GPR3P46089 330 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 PCBP4P57723 403 aaKnown RBP11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ERVPABLB-1P60509 514 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 B4GALNT1Q00973 533 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 EIF3IQ13347 325 aaKnown RBP11.21□□□□□ -0.61
MRPL55-203ENST00000336520 OLIG2Q13516 323 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 SPARCL1Q14515 664 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 RPS6KA1Q15418 735 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 CHRNA6Q15825 494 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 COL28A1Q2UY09 1125 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 P3H1Q32P28 736 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 PHF19Q5T6S3 580 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 RANBP10Q6VN20 620 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 USP53Q70EK8 1073 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 RAB11FIP2Q7L804 512 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 PIM3Q86V86 326 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 LRRTM4Q86VH4 590 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 TRAPPC5Q8IUR0 188 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 SFRP1Q8N474 314 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 FBXO39Q8N4B4 442 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 SLC35B2Q8TB61 432 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 UBE2Q2Q8WVN8 375 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ATG4AQ8WYN0 398 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 SLC38A3Q99624 504 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 TBL1YQ9BQ87 522 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 TMEM121Q9BTD3 319 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ZCCHC2Q9C0B9 1178 aaKnown RBP11.21□□□□□ -0.61
MRPL55-203ENST00000336520 RDH14Q9HBH5 336 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 KLC4Q9NSK0 619 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 PCDHGA8Q9Y5G5 932 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ARL5AQ9Y689 179 aa11.21□□□□□ -0.61
MRPL55-203ENST00000336520 ZFC3H1O60293 1989 aaKnown RBP11.21□□□□□ -0.62
MRPL55-203ENST00000336520 SCN8AQ9UQD0 1980 aa11.21□□□□□ -0.62
MRPL55-203ENST00000336520 KIF26BQ2KJY2 2108 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 PLD2O14939 933 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 CHUKO15111 745 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 KMOO15229 486 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 PPM1DO15297 605 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A9O60656 530 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 TNFSF15O95150 251 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 CRTAMO95727 393 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 EML2O95834 649 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 JMJD7P0C870 316 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 F3P13726 295 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 ZNF7P17097 686 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 VCLP18206 1134 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A6P19224 532 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A1P22309 533 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A4P22310 534 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 AKT1P31749 480 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A3P35503 534 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A5P35504 534 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 FASLGP48023 281 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 HHEXQ03014 270 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 NFATC2Q13469 925 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 ITGA9Q13797 1035 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 PTPRCAPQ14761 206 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 NR1D2Q14995 579 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 TAF1AQ15573 450 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 CLPPQ16740 277 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 LDLRAP1Q5SW96 308 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 IYDQ6PHW0 289 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 ZNF761Q86XN6 746 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 JAMLQ86YT9 394 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 LRRC8AQ8IWT6 810 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 TAB3Q8N5C8 712 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 ZNF248Q8NDW4 579 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 OR4K2Q8NGD2 314 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 BRSK1Q8TDC3 778 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 AHCYL2Q96HN2 611 aaKnown RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 NAF1Q96HR8 494 aaKnown RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 SLC46A1Q96NT5 459 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 NUDT22Q9BRQ3 303 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 ASCL3Q9NQ33 180 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 PRDM8Q9NQV8 689 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 FEZ2Q9UHY8 353 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-203ENST00000336520 TMPRSS11EQ9UL52 423 aa11.2□□□□□ -0.62
MRPL55-203ENST00000336520 LOXL2Q9Y4K0 774 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms