RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 UBA6A0AVT1 1052 aaPredicted RBP21.29■■□□□ 1
TPM1-204ENST00000334895 NDUFS2O75306 463 aa21.29■■□□□ 1
TPM1-204ENST00000334895 PYGLP06737 847 aa21.29■■□□□ 1
TPM1-204ENST00000334895 MYZAPP0CAP1 466 aa21.29■■□□□ 1
TPM1-204ENST00000334895 HNRNPA2B1P22626 353 aaKnown RBP21.29■■□□□ 1
TPM1-204ENST00000334895 CDK3Q00526 305 aa21.29■■□□□ 1
TPM1-204ENST00000334895 TNFAIP8L3Q5GJ75 292 aa21.29■■□□□ 1
TPM1-204ENST00000334895 CTSL3PQ5NE16 218 aa21.29■■□□□ 1
TPM1-204ENST00000334895 RBFAQ8N0V3 343 aa21.29■■□□□ 1
TPM1-204ENST00000334895 TMEM145Q8NBT3 493 aa21.29■■□□□ 1
TPM1-204ENST00000334895 ARL8AQ96BM9 186 aa21.29■■□□□ 1
TPM1-204ENST00000334895 PGM2Q96G03 612 aa21.29■■□□□ 1
TPM1-204ENST00000334895 GPR22Q99680 433 aa21.29■■□□□ 1
TPM1-204ENST00000334895 LGR4Q9BXB1 951 aa21.29■■□□□ 1
TPM1-204ENST00000334895 TEX101Q9BY14 249 aa21.29■■□□□ 1
TPM1-204ENST00000334895 VPS9D1Q9Y2B5 631 aa21.29■■□□□ 1
TPM1-204ENST00000334895 MED16Q9Y2X0 877 aa21.29■■□□□ 1
TPM1-204ENST00000334895 SLCO1B1Q9Y6L6 691 aa21.29■■□□□ 1
TPM1-204ENST00000334895 CEP192Q8TEP8 1941 aa21.29■■□□□ 1
TPM1-204ENST00000334895 POM121BA6NF01 834 aa21.28■■□□□ 1
TPM1-204ENST00000334895 METTL12A8MUP2 240 aa21.28■■□□□ 1
TPM1-204ENST00000334895 TRIM49D1C9J1S8 452 aa21.28■■□□□ 1
TPM1-204ENST00000334895 KRT38O76015 456 aa21.28■■□□□ 1
TPM1-204ENST00000334895 SLC25A14O95258 325 aaPredicted RBP21.28■■□□□ 1
TPM1-204ENST00000334895 SYF2O95926 243 aaKnown RBP21.28■■□□□ 1
TPM1-204ENST00000334895 FMO4P31512 558 aa21.28■■□□□ 1
TPM1-204ENST00000334895 NUBP1P53384 320 aa21.28■■□□□ 1
TPM1-204ENST00000334895 ADARP55265 1226 aaKnown RBP21.28■■□□□ 1
TPM1-204ENST00000334895 CLDN2P57739 230 aa21.28■■□□□ 1
TPM1-204ENST00000334895 RPL6Q02878 288 aaKnown RBP21.28■■□□□ 1
TPM1-204ENST00000334895 LDLRAP1Q5SW96 308 aa21.28■■□□□ 1
TPM1-204ENST00000334895 CROCCP2Q86T23 111 aa21.28■■□□□ 1
TPM1-204ENST00000334895 LONP2Q86WA8 852 aa21.28■■□□□ 1
TPM1-204ENST00000334895 PHYKPLQ8IUZ5 450 aa21.28■■□□□ 1
TPM1-204ENST00000334895 SPNS2Q8IVW8 549 aa21.28■■□□□ 1
TPM1-204ENST00000334895 DCLK2Q8N568 766 aa21.28■■□□□ 1
TPM1-204ENST00000334895 CLDN19Q8N6F1 224 aa21.28■■□□□ 1
TPM1-204ENST00000334895 PRSS33Q8NF86 280 aa21.28■■□□□ 1
TPM1-204ENST00000334895 CADM4Q8NFZ8 388 aa21.28■■□□□ 1
TPM1-204ENST00000334895 GDAP1Q8TB36 358 aa21.28■■□□□ 1
TPM1-204ENST00000334895 HIC2Q96JB3 615 aa21.28■■□□□ 1
TPM1-204ENST00000334895 TTC1Q99614 292 aa21.28■■□□□ 1
TPM1-204ENST00000334895 PCED1AQ9H1Q7 454 aa21.28■■□□□ 1
TPM1-204ENST00000334895 CENPHQ9H3R5 247 aa21.28■■□□□ 1
TPM1-204ENST00000334895 OR1A2Q9Y585 309 aa21.28■■□□□ 1
TPM1-204ENST00000334895 MUC6Q6W4X9 2439 aa21.28■■□□□ 1
TPM1-204ENST00000334895 IQANK1A0A1B0GTG1 560 aa21.27■■□□□ 1
TPM1-204ENST00000334895 FAM95CA0A1B0GW59 222 aa21.27■■□□□ 1
TPM1-204ENST00000334895 H0Y8X5 98 aa21.27■■□□□ 1
TPM1-204ENST00000334895 PRMT5O14744 637 aaPredicted RBP21.27■■□□□ 1
TPM1-204ENST00000334895 RGS16O15492 202 aaPredicted RBP21.27■■□□□ 1
TPM1-204ENST00000334895 KRT37O76014 449 aa21.27■■□□□ 1
TPM1-204ENST00000334895 SNRPAP09012 282 aaKnown RBP21.27■■□□□ 1
TPM1-204ENST00000334895 ZNF7P17097 686 aaPredicted RBP21.27■■□□□ 1
TPM1-204ENST00000334895 RPS3P23396 243 aaKnown RBP eCLIP21.27■■□□□ 1
TPM1-204ENST00000334895 CNTFP26441 200 aa21.27■■□□□ 1
TPM1-204ENST00000334895 PPARGP37231 505 aaPredicted RBP21.27■■□□□ 1
TPM1-204ENST00000334895 PGGT1BP53609 377 aa21.27■■□□□ 1
TPM1-204ENST00000334895 TIAL1Q01085 375 aaKnown RBP eCLIP21.27■■□□□ 1
TPM1-204ENST00000334895 GCNT7Q6ZNI0 430 aa21.27■■□□□ 1
TPM1-204ENST00000334895 SLC41A1Q8IVJ1 513 aa21.27■■□□□ 1
TPM1-204ENST00000334895 GPATCH11Q8N954 259 aa21.27■■□□□ 1
TPM1-204ENST00000334895 BMFQ96LC9 184 aa21.27■■□□□ 1
TPM1-204ENST00000334895 AARSD1Q9BTE6 412 aaKnown RBP21.27■■□□□ 1
TPM1-204ENST00000334895 ACBD3Q9H3P7 528 aa21.27■■□□□ 1
TPM1-204ENST00000334895 WDR26Q9H7D7 661 aa21.27■■□□□ 1
TPM1-204ENST00000334895 CAB39LQ9H9S4 337 aa21.27■■□□□ 1
TPM1-204ENST00000334895 FBXO4Q9UKT5 387 aa21.27■■□□□ 1
TPM1-204ENST00000334895 PIKFYVEQ9Y2I7 2098 aa21.27■■□□□ 1
TPM1-204ENST00000334895 CACNA1HO95180 2353 aa21.27■■□□□ 1
TPM1-204ENST00000334895 A0A1W2PPC4 97 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 PFDN6O15212 129 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 SGTAO43765 313 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 ALDOAP04075 364 aaKnown RBP21.26■□□□□ 0.99
TPM1-204ENST00000334895 NSG1P42857 185 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 TTMPQ5BVD1 217 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 SLC36A4Q6YBV0 504 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 OLFM1Q99784 485 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 CORO1CQ9ULV4 474 aaPredicted RBP21.26■□□□□ 0.99
TPM1-204ENST00000334895 DMTF1Q9Y222 760 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 A0A1W2PPM1 405 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 PKMP14618 531 aaKnown RBP21.26■□□□□ 0.99
TPM1-204ENST00000334895 AKT1P31749 480 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 AKT2P31751 481 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 CSRP3P50461 194 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 CDKN2DP55273 166 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 TCF15Q12870 199 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 SRSF5Q13243 272 aaKnown RBP21.26■□□□□ 0.99
TPM1-204ENST00000334895 PDE1CQ14123 709 aaPredicted RBP21.26■□□□□ 0.99
TPM1-204ENST00000334895 HECTD2Q5U5R9 776 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 TAOK1Q7L7X3 1001 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 CMC1Q7Z7K0 106 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 ADGRG6Q86SQ4 1221 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 RASGEF1AQ8N9B8 481 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 SNX19Q92543 992 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 NELL1Q92832 810 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 ISL2Q96A47 359 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 ELMO2Q96JJ3 720 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 SERAC1Q96JX3 654 aa21.26■□□□□ 0.99
TPM1-204ENST00000334895 APOOQ9BUR5 198 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms