RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SDR39U1Q9NRG7 319 aaPredicted RBP13.64□□□□□ -0.23
SYNE3-201ENST00000334258 EXD2Q9NVH0 621 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 UBQLN1Q9UMX0 589 aaKnown RBP13.64□□□□□ -0.23
SYNE3-201ENST00000334258 A0A1W2PP18 115 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 UBXN8O00124 270 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 INMTO95050 263 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 FYNP06241 537 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 MYL3P08590 195 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 GSTM2P28161 218 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 RPL34P49207 117 aaKnown RBP13.64□□□□□ -0.23
SYNE3-201ENST00000334258 TAF6P49848 677 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 ALDH3A2P51648 485 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 OR4D2P58180 307 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 CHRNB3Q05901 458 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 FXNQ16595 210 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 TTC23Q5W5X9 447 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 ITFG1Q8TB96 612 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 INTS7Q9NVH2 962 aaKnown RBP13.64□□□□□ -0.23
SYNE3-201ENST00000334258 POLG2Q9UHN1 485 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 PCDHB3Q9Y5E6 796 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 PCDHGA8Q9Y5G5 932 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 OAS3Q9Y6K5 1087 aaKnown RBP13.64□□□□□ -0.23
SYNE3-201ENST00000334258 SHROOM3Q8TF72 1996 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 ALOX5P09917 674 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 SERPINB1P30740 379 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 GSSP48637 474 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 HCAR3P49019 387 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 CDKN2DP55273 166 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 SEMA3BQ13214 749 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 CLEC20AQ6ZU45 233 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 SLC2A13Q96QE2 648 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 FCRL5Q96RD9 977 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 ARHGAP39Q9C0H5 1083 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 POU2F3Q9UKI9 436 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 TCRBV5S2A0A599 114 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 TCF3P15923 654 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 S100A1P23297 94 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 MTHFRP42898 656 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 DCAF4L1Q3SXM0 396 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 RBM48Q5RL73 367 aaKnown RBP13.63□□□□□ -0.23
SYNE3-201ENST00000334258 C6orf141Q5SZD1 244 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 DEPDC1Q5TB30 811 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 VASH1Q7L8A9 365 aaPredicted RBP13.63□□□□□ -0.23
SYNE3-201ENST00000334258 DSG4Q86SJ6 1040 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 TTC30BQ8N4P2 665 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 SLC22A17Q8WUG5 538 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 TEX37Q96LM6 180 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 PPM1MQ96MI6 270 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 RGS18Q9NS28 235 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 DKK3Q9UBP4 350 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 EVLQ9UI08 416 aaPredicted RBP13.63□□□□□ -0.23
SYNE3-201ENST00000334258 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
SYNE3-201ENST00000334258 OR51F1A6NGY5 319 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 AGXTP21549 392 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 UFM1P61960 85 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 DGCR6Q14129 220 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 ZNF792Q3KQV3 632 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 FAM98BQ52LJ0 330 aaKnown RBP13.63□□□□□ -0.23
SYNE3-201ENST00000334258 UTS2BQ765I0 119 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 OSTM1Q86WC4 334 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 ANKRD13BQ86YJ7 626 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 KIAA2013Q8IYS2 634 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 S100ZQ8WXG8 99 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 PTERQ96BW5 349 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 UBXN10Q96LJ8 280 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 NSMCE3Q96MG7 304 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 NODALQ96S42 347 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 TINF2Q9BSI4 451 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 MUC13Q9H3R2 512 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 TREX1Q9NSU2 369 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
SYNE3-201ENST00000334258 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
SYNE3-201ENST00000334258 UNC80Q8N2C7 3258 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 PDE4DIPQ5VU43 2346 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 G3V2T6 193 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 CD4P01730 458 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 CYBBP04839 570 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 AIF1P55008 147 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 WNT3AP56704 352 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 CLCQ05315 142 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 PHKG1Q16816 387 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 TMEM207Q6UWW9 146 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 CCDC81Q6ZN84 652 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 EHD1Q9H4M9 534 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 CACNG4Q9UBN1 327 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 MOSPD1Q9UJG1 213 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 LEF1Q9UJU2 399 aaPredicted RBP13.62□□□□□ -0.23
SYNE3-201ENST00000334258 ASB14A6NK59 587 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 SUPT3HB4E1H0 165 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 NDUFS2O75306 463 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 SLC22A3O75751 556 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 LEPRP48357 1165 aaKnown RBP13.62□□□□□ -0.23
SYNE3-201ENST00000334258 SERPINB10P48595 397 aa13.62□□□□□ -0.23
SYNE3-201ENST00000334258 IL1RL1Q01638 556 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms