RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 BTG3Q14201 252 aaPredicted RBP18.77■□□□□ 0.59
RFTN1-201ENST00000334133 AAK1Q2M2I8 961 aa18.77■□□□□ 0.59
RFTN1-201ENST00000334133 RABL3Q5HYI8 236 aa18.77■□□□□ 0.59
RFTN1-201ENST00000334133 DHFR2Q86XF0 187 aa18.77■□□□□ 0.59
RFTN1-201ENST00000334133 TICAM1Q8IUC6 712 aa18.77■□□□□ 0.59
RFTN1-201ENST00000334133 OAS3Q9Y6K5 1087 aaKnown RBP18.77■□□□□ 0.59
RFTN1-201ENST00000334133 V9GYQ6 96 aa18.77■□□□□ 0.59
RFTN1-201ENST00000334133 IL2P60568 153 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 UFM1P61960 85 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 SAMD4BQ5PRF9 694 aaKnown RBP18.76■□□□□ 0.59
RFTN1-201ENST00000334133 GPSM1Q86YR5 675 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 APCDD1Q8J025 514 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 MYO1HQ8N1T3 1032 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 ZNF461Q8TAF7 563 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 IGSF21Q96ID5 467 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 POPDC3Q9HBV1 291 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 USP22Q9UPT9 525 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 TBC1D30Q9Y2I9 924 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 NDUFAF1Q9Y375 327 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 C5orf42Q9H799 3197 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 PENKP01210 267 aaPredicted RBP18.76■□□□□ 0.59
RFTN1-201ENST00000334133 PYGLP06737 847 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 ADCY4Q8NFM4 1077 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 C2orf15Q8WU43 125 aaKnown RBP18.76■□□□□ 0.59
RFTN1-201ENST00000334133 PRPF18Q99633 342 aaKnown RBP18.76■□□□□ 0.59
RFTN1-201ENST00000334133 FEM1AQ9BSK4 669 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 KLF16Q9BXK1 252 aaPredicted RBP18.76■□□□□ 0.59
RFTN1-201ENST00000334133 HIPK3Q9H422 1215 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 EVLQ9UI08 416 aaPredicted RBP18.76■□□□□ 0.59
RFTN1-201ENST00000334133 VPS51Q9UID3 782 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 PCTPQ9UKL6 214 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 SARDHQ9UL12 918 aa18.76■□□□□ 0.59
RFTN1-201ENST00000334133 AKAP10O43572 662 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 CNPY1Q3B7I2 92 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 HMBOX1Q6NT76 420 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 DNAJB7Q7Z6W7 309 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 SLC15A3Q8IY34 581 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 TTC30BQ8N4P2 665 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 PCYOX1LQ8NBM8 494 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 PLD4Q96BZ4 506 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 TMEM74Q96NL1 305 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 CDK5RAP1Q96SZ6 601 aaKnown RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 LHX3Q9UBR4 397 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 CNOT6Q9ULM6 557 aaKnown RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 CLEC4EQ9ULY5 219 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 RPS17P08708 135 aaKnown RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 MTHFD1P11586 935 aaKnown RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 NCK1P16333 377 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 PSMC3P17980 439 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 UGT1A1P22309 533 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 UGT1A4P22310 534 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 UGT1A3P35503 534 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 UGT1A5P35504 534 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 PIK3CGP48736 1102 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 TTPAP49638 278 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ACADVLP49748 655 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 MYBPC1Q00872 1141 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 CDH18Q13634 790 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ARMC3Q5W041 872 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 TPGS1Q6ZTW0 290 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 PDZD8Q8NEN9 1154 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 TMEM175Q9BSA9 504 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 TNKS2Q9H2K2 1166 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 COMMD8Q9NX08 183 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 CMTM6Q9NX76 183 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ARIH1Q9Y4X5 557 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 SAC3D1A6NKF1 404 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 FXYD1O00168 92 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 MT-ND1P03886 318 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ZNF26P17031 533 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 HOXB8P17481 243 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 HTR6P50406 440 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ATP6V0D1P61421 351 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 NCEH1Q6PIU2 408 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ZNF483Q8TF39 744 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 DEFB118Q96PH6 123 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 ZNF334Q9HCZ1 680 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 SPATS2LQ9NUQ6 558 aaKnown RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 AFF4Q9UHB7 1163 aaKnown RBP18.75■□□□□ 0.59
RFTN1-201ENST00000334133 LZTS1Q9Y250 596 aa18.75■□□□□ 0.59
RFTN1-201ENST00000334133 C8BP07358 591 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 SMIM18P0DKX4 95 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 GJA1P17302 382 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 GSTT1P30711 240 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 CREB5Q02930 508 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 TIGD2Q4W5G0 525 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 PAGE3Q5JUK9 113 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 ACBD5Q5T8D3 534 aaPredicted RBP18.74■□□□□ 0.59
RFTN1-201ENST00000334133 SLC30A9Q6PML9 568 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 TMEM150AQ86TG1 271 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 NKAPQ8N5F7 415 aaKnown RBP18.74■□□□□ 0.59
RFTN1-201ENST00000334133 CNPP09543 421 aaKnown RBP18.74■□□□□ 0.59
RFTN1-201ENST00000334133 GRM2Q14416 872 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 TGFBIQ15582 683 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 C8orf82Q6P1X6 216 aaPredicted RBP18.74■□□□□ 0.59
RFTN1-201ENST00000334133 MARVELD2Q8N4S9 558 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 LKAAEAR1Q8TD35 194 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 PXYLP1Q8TE99 480 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 TRAPPC9Q96Q05 1148 aa18.74■□□□□ 0.59
RFTN1-201ENST00000334133 ASB2Q96Q27 587 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms