RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SEC24DO94855 1032 aaPredicted RBP11.14□□□□□ -0.63
POLR1B-202ENST00000333990 TGDSO95455 350 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
POLR1B-202ENST00000333990 HNRNPLP14866 589 aaKnown RBP eCLIP11.14□□□□□ -0.63
POLR1B-202ENST00000333990 TCF4P15884 667 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 CDH3P22223 829 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 FASP25445 335 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 ASMTP46597 345 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 GNPDA1P46926 289 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 PTPN5P54829 565 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 GRM2Q14416 872 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 FASTKD3Q14CZ7 662 aaKnown RBP11.14□□□□□ -0.63
POLR1B-202ENST00000333990 CYTH1Q15438 398 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 CPNE8Q86YQ8 564 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 CYP4X1Q8N118 509 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 SPATA6LQ8N4H0 392 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 SLC38A3Q99624 504 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 C8orf33Q9H7E9 229 aaPredicted RBP11.14□□□□□ -0.63
POLR1B-202ENST00000333990 SGK2Q9HBY8 427 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 HSFX1Q9UBD0 423 aa11.14□□□□□ -0.63
POLR1B-202ENST00000333990 ZBTB42B2RXF5 422 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 CCL22O00626 93 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 CLDN9O95484 217 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 VHLP40337 213 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 ACTR1BP42025 376 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 TAS2R39P59534 338 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 ACTR1AP61163 376 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 DEFB103AP81534 67 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 CASD1Q96PB1 797 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 TTLL2Q9BWV7 592 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 ZNF780BQ9Y6R6 833 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 CLK3P49761 638 aaKnown RBP11.13□□□□□ -0.63
POLR1B-202ENST00000333990 SIRPB2Q5JXA9 342 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 ZFP1Q6P2D0 407 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 GPR156Q8NFN8 814 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 FIG4Q92562 907 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 AARSD1Q9BTE6 412 aaKnown RBP11.13□□□□□ -0.63
POLR1B-202ENST00000333990 TRIM4Q9C037 500 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 OR2AG1Q9H205 316 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 NEMP2A6NFY4 417 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 NBNO60934 754 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 GNAZP19086 355 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 ITPKAP23677 461 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 GRIA2P42262 883 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 LCP2Q13094 533 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 TBCELQ5QJ74 424 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 KLHDC10Q6PID8 442 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 LYSMD3Q7Z3D4 306 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 CPNE9Q8IYJ1 553 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 WDTC1Q8N5D0 677 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 CAMKK1Q8N5S9 505 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 POU5F2Q8N7G0 328 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 DNAJC9Q8WXX5 260 aa11.13□□□□□ -0.63
POLR1B-202ENST00000333990 RGSL1A5PLK6 1076 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PAPSS2O95340 614 aaPredicted RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 ATP6V1B2P21281 511 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 IFNGR2P38484 337 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 ARRB1P49407 418 aaPredicted RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 GSCP56915 257 aaPredicted RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 ZBTB6Q15916 424 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 FBXO43Q4G163 708 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 USP39Q53GS9 565 aaKnown RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 SLC8B1Q6J4K2 584 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 CYB5D1Q6P9G0 228 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 LRRTM4Q86VH4 590 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PQLC3Q8N755 202 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 RP9Q8TA86 221 aaKnown RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PEX13Q92968 403 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 MIPEPQ99797 713 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 CEP44Q9C0F1 390 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 IPPKQ9H8X2 491 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 SLC40A1Q9NP59 571 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PCDHGA11Q9Y5H2 935 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 BCORQ6W2J9 1755 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 RFPL2O75678 378 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PDHA1P08559 390 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 SLC35G6P0C7Q6 338 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 TSPAN8P19075 237 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 SUOXP51687 545 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 RCN1Q15293 331 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 RNF43Q68DV7 783 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 ZYG11AQ6WRX3 759 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 SPATA19Q7Z5L4 167 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 ATG16L2Q8NAA4 619 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 OR13C4Q8NGS5 318 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 NELL1Q92832 810 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 MRPL48Q96GC5 212 aaKnown RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 PEBP4Q96S96 227 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 SMG9Q9H0W8 520 aaKnown RBP11.12□□□□□ -0.63
POLR1B-202ENST00000333990 C3orf14Q9HBI5 128 aa11.12□□□□□ -0.63
POLR1B-202ENST00000333990 GDE1Q9NZC3 331 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms