RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RECQL5O94762 991 aaPredicted RBP23.05■■□□□ 1.28
TSEN54-201ENST00000333213 C7P10643 843 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 PKMP14618 531 aaKnown RBP23.05■■□□□ 1.28
TSEN54-201ENST00000333213 SLC12A2P55011 1212 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 B4GALNT1Q00973 533 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 ZNF852Q6ZMS4 543 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 ARMC2Q8NEN0 867 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 DTX3LQ8TDB6 740 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.05■■□□□ 1.28
TSEN54-201ENST00000333213 GPR78Q96P69 363 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 IQCGQ9H095 443 aaKnown RBP23.05■■□□□ 1.28
TSEN54-201ENST00000333213 ARHGEF3Q9NR81 526 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 MBD1Q9UIS9 605 aaPredicted RBP23.05■■□□□ 1.28
TSEN54-201ENST00000333213 VPS9D1Q9Y2B5 631 aa23.05■■□□□ 1.28
TSEN54-201ENST00000333213 PRMT5O14744 637 aaPredicted RBP23.04■■□□□ 1.28
TSEN54-201ENST00000333213 NIPSNAP2O75323 286 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 RNASEH2AO75792 299 aaKnown RBP23.04■■□□□ 1.28
TSEN54-201ENST00000333213 INSCQ1MX18 579 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 WLSQ5T9L3 541 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 TMEM151AQ8N4L1 468 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 MRGPRX1Q96LB2 322 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 UBXN10Q96LJ8 280 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 SLC30A3Q99726 388 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 UNKQ9C0B0 810 aaKnown RBP23.04■■□□□ 1.28
TSEN54-201ENST00000333213 GPAMQ9HCL2 828 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 CD93Q9NPY3 652 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 GEMIN8Q9NWZ8 242 aaKnown RBP23.04■■□□□ 1.28
TSEN54-201ENST00000333213 FBXL12Q9NXK8 326 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 MMP17Q9ULZ9 603 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 C19orf67A6NJJ6 358 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 SOD1P00441 154 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 TARSP26639 723 aaKnown RBP23.04■■□□□ 1.28
TSEN54-201ENST00000333213 IRX4P78413 519 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 FZD5Q13467 585 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 ITGA9Q13797 1035 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 CYP2U1Q7Z449 544 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 TRAM1L1Q8N609 369 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 GBP7Q8N8V2 638 aaPredicted RBP23.04■■□□□ 1.28
TSEN54-201ENST00000333213 CKAP2Q8WWK9 683 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 NXNL1Q96CM4 212 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 AP2M1Q96CW1 435 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 FBRSQ9HAH7 460 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 SMOXQ9NWM0 555 aa23.04■■□□□ 1.28
TSEN54-201ENST00000333213 WDR91A4D1P6 747 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 K7ESM1 405 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 PFDN6O15212 129 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 AP1G1O43747 822 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 SNX3O60493 162 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 PLIN3O60664 434 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 ESR1P03372 595 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 CRY1Q16526 586 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 TAF1BQ53T94 588 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-201ENST00000333213 TRPM8Q7Z2W7 1104 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 NRSN1Q8IZ57 195 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 RBFAQ8N0V3 343 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 DYDC1Q8WWB3 177 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 CDH19Q9H159 772 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 IGSF5Q9NSI5 407 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 C2orf42Q9NWW7 574 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 ANKRD6Q9Y2G4 727 aa23.03■■□□□ 1.28
TSEN54-201ENST00000333213 IGLV3-16A0A075B6K0 115 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 DNTTP04053 509 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 PROCP04070 461 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 ZNF7P17097 686 aaPredicted RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 GAS6Q14393 721 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 KHDC1Q4VXA5 237 aaKnown RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 EOGTQ5NDL2 527 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 GPRC6AQ5T6X5 926 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 HHATQ5VTY9 493 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 KYAT3Q6YP21 454 aaKnown RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 RAVER1Q8IY67 606 aaKnown RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 GIMAP7Q8NHV1 300 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 TSPAN17Q96FV3 270 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 GPR21Q99679 349 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 ZSCAN5AQ9BUG6 496 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 MECRQ9BV79 373 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 ZDHHC3Q9NYG2 299 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 RUVBL2Q9Y230 463 aaKnown RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 MTX2O75431 263 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 RHOBTB1O94844 696 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 KLHL2O95198 593 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 SBK3P0C264 359 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 NDUFV2P19404 249 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 RPS3P23396 243 aaKnown RBP eCLIP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 SERPINB4P48594 390 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 PRKCQQ04759 706 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 ILF2Q12905 390 aaKnown RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 RIPK1Q13546 671 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 SEPT7Q16181 437 aaKnown RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 HSF5Q4G112 596 aaPredicted RBP23.02■■□□□ 1.28
TSEN54-201ENST00000333213 LYPLAL1Q5VWZ2 237 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 LKAAEAR1Q8TD35 194 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 CXorf40AQ8TE69 158 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 SIPA1Q96FS4 1042 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 CCDC68Q9H2F9 335 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 RAD18Q9NS91 495 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 WNT16Q9UBV4 365 aa23.02■■□□□ 1.28
TSEN54-201ENST00000333213 A0A087X1B8 175 aa23.01■■□□□ 1.27
TSEN54-201ENST00000333213 IGLON5A6NGN9 336 aa23.01■■□□□ 1.27
TSEN54-201ENST00000333213 TSPAN6O43657 245 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms