RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 OR13J1Q8NGT2 312 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 SCG3Q8WXD2 468 aaKnown RBP15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 ULK4Q96C45 1275 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 TTC25Q96NG3 672 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 GSDMCQ9BYG8 508 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 TRIM31Q9BZY9 425 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 ZCCHC2Q9C0B9 1178 aaKnown RBP15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 RIMKLBQ9ULI2 386 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 DCHS1Q96JQ0 3298 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 PLXNB3Q9ULL4 1909 aa15.71■□□□□ 0.11
CCDC28A-201ENST00000332797 CCDC162PA2VCL2 907 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 OR51F1A6NGY5 319 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 GPR89AB7ZAQ6 455 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 TPP1O14773 563 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 GRID2O43424 1007 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 TNFSF14O43557 240 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 CDK14O94921 469 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 GPR89BP0CG08 455 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 PRSS56P0CW18 603 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 MLNP12872 115 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 MSH3P20585 1137 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 PSMA3P25788 255 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 IVDP26440 423 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 AK4P27144 223 aaPredicted RBP15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 CTBSQ01459 385 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 TMEM115Q12893 351 aaPredicted RBP15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 DNAJC3Q13217 504 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 PROX2Q3B8N5 592 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 PLA2G4EQ3MJ16 856 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 C6orf132Q5T0Z8 1188 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 ZCCHC8Q6NZY4 707 aaKnown RBP15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 CASC4Q6P4E1 433 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 SLC30A9Q6PML9 568 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 CHST15Q7LFX5 561 aaPredicted RBP15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 TAS2R42Q7RTR8 314 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 ZNF572Q7Z3I7 529 aaPredicted RBP15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 HOOK3Q86VS8 718 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 NRROSQ86YC3 692 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 NXPE1Q8N323 547 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 SDR16C5Q8N3Y7 309 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 KIF18AQ8NI77 898 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 GPBAR1Q8TDU6 330 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 HDAC10Q969S8 669 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 APOLD1Q96LR9 279 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 SAMD15Q9P1V8 674 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 SIRPGQ9P1W8 387 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 GPR34Q9UPC5 381 aa15.71■□□□□ 0.1
CCDC28A-201ENST00000332797 EFCAB8A8MWE9 144 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 RAD51CO43502 376 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 MYF5P13349 255 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 ACP5P13686 325 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 NMBRP28336 390 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 CDKN1CP49918 316 aaPredicted RBP15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 PRAMEP78395 509 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 DAB2P98082 770 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 ACVR1Q04771 509 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 CACNG1Q06432 222 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 LRP8Q14114 963 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 GPR33Q49SQ1 333 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 CCDC157Q569K6 752 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 LVRNQ6Q4G3 990 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 AFTPHQ6ULP2 937 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 MAATS1Q7Z4T9 603 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 GLRX5Q86SX6 157 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 LRRTM4Q86VH4 590 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 TRAPPC5Q8IUR0 188 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 OR6P1Q8NGX9 317 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 PEX13Q92968 403 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 SNF8Q96H20 258 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 ST14Q9Y5Y6 855 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 MRFAP1Q9Y605 127 aa15.7■□□□□ 0.1
CCDC28A-201ENST00000332797 FAM187AA6NFU0 413 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 SDR42E2A6NKP2 422 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 AGAP14A8MT82 685 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 B4DGG1 531 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 CHUKO15111 745 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 GOT2P00505 430 aaKnown RBP15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 ACTR1BP42025 376 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 ACTR1AP61163 376 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 CES3Q6UWW8 571 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 DET1Q7L5Y6 550 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 SERPINA9Q86WD7 417 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 RASGEF1AQ8N9B8 481 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 FAM181AQ8N9Y4 354 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 KYQ8NBH2 561 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 GLMNQ92990 594 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 DCUN1D1Q96GG9 259 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 COPS8Q99627 209 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 KIFC1Q9BW19 673 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 BOCQ9BWV1 1114 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 DPEP2Q9H4A9 486 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 MRM3Q9HC36 420 aaKnown RBP15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 TAAR2Q9P1P5 351 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 GULP1Q9UBP9 304 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 SOX13Q9UN79 622 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 KCNK6Q9Y257 313 aa15.69■□□□□ 0.1
CCDC28A-201ENST00000332797 TRBV5-4A0A0C4DH59 114 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms