RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 GRK7Q8WTQ7 553 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 NLE1Q9NVX2 485 aaPredicted RBP13.85□□□□□ -0.19
LIMS1-201ENST00000332345 PIH1D1Q9NWS0 290 aaKnown RBP13.85□□□□□ -0.19
LIMS1-201ENST00000332345 FKBPLQ9UIM3 349 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 KLK13Q9UKR3 277 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 TMPRSS11EQ9UL52 423 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 PRKAB1Q9Y478 270 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 PLEKHM1Q9Y4G2 1056 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 SAR1BQ9Y6B6 198 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 SLC30A1Q9Y6M5 507 aa13.85□□□□□ -0.19
LIMS1-201ENST00000332345 HEATR9A2RTY3 570 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 MROH6A6NGR9 719 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 GAPDHSO14556 408 aaPredicted RBP13.84□□□□□ -0.19
LIMS1-201ENST00000332345 ZW10O43264 779 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 NOBOXO60393 691 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 KCNJ13O60928 360 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 MTX2O75431 263 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 KRT14P02533 472 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 PNLIPP16233 465 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 GLB1P16278 677 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 MSH3P20585 1137 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 ADRA1DP25100 572 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 FNTAP49354 379 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 SARNPP82979 210 aaKnown RBP13.84□□□□□ -0.19
LIMS1-201ENST00000332345 XIAPP98170 497 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 INSM1Q01101 510 aaPredicted RBP13.84□□□□□ -0.19
LIMS1-201ENST00000332345 NFATC2Q13469 925 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 BIRC2Q13490 618 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 GPR33Q49SQ1 333 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 C14orf28Q4W4Y0 310 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 CERCAMQ5T4B2 595 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 TTC27Q6P3X3 843 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 NLRP9Q7RTR0 991 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 SNX20Q7Z614 316 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 DDHD1Q8NEL9 900 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 HEXDCQ8WVB3 486 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 ULK4Q96C45 1275 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 CDKN2AIPNLQ96HQ2 116 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 ZNF514Q96K75 400 aaPredicted RBP13.84□□□□□ -0.19
LIMS1-201ENST00000332345 CASS4Q9NQ75 786 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 SMOXQ9NWM0 555 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 SMARCAL1Q9NZC9 954 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 LRIT1Q9P2V4 623 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 ST14Q9Y5Y6 855 aa13.84□□□□□ -0.19
LIMS1-201ENST00000332345 DNMT3AQ9Y6K1 912 aaPredicted RBP13.84□□□□□ -0.19
LIMS1-201ENST00000332345 UNC13CQ8NB66 2214 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 H7C0S8 307 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 NUDT21O43809 227 aaKnown RBP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 PHF2O75151 1096 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 ECEL1O95672 775 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 RALBP11234 206 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 ACP5P13686 325 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 ZNF7P17097 686 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 VCLP18206 1134 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 ITGALP20701 1170 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 AKT1P31749 480 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 GRIA1P42261 906 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 NPY2RP49146 381 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 CLCNKAP51800 687 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 GPS1Q13098 491 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 HLTFQ14527 1009 aaKnown RBP eCLIP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 TRIP13Q15645 432 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 INSCQ1MX18 579 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 PERM1Q5SV97 790 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 GPRC6AQ5T6X5 926 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 HES3Q5TGS1 186 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 DCUN1D1Q96GG9 259 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 DNAJC1Q96KC8 554 aaKnown RBP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 RANBP9Q96S59 729 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 KLC4Q9NSK0 619 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 BFARQ9NZS9 450 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 RIMKLBQ9ULI2 386 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 CLCA2Q9UQC9 943 aa13.83□□□□□ -0.2
LIMS1-201ENST00000332345 PCYT1BQ9Y5K3 369 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-201ENST00000332345 MYLKQ15746 1914 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 OR5K4A6NMS3 321 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 RHPN2P1A8MT19 583 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 AGAP14A8MT82 685 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 MT-CO3P00414 261 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 SLC2A4P14672 509 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 TPSB2P20231 275 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 PSMA3P25788 255 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 MC4RP32245 332 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 VPS41P49754 854 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 TPSAB1Q15661 275 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 KHDC1Q4VXA5 237 aaKnown RBP13.82□□□□□ -0.2
LIMS1-201ENST00000332345 CCDC38Q502W7 563 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 ZRANB3Q5FWF4 1079 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 PCID2Q5JVF3 399 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 TMEM220Q6QAJ8 160 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 CRTC3Q6UUV7 619 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 C17orf82Q86X59 251 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-201ENST00000332345 TRAPPC5Q8IUR0 188 aa13.82□□□□□ -0.2
LIMS1-201ENST00000332345 ARL14Q8N4G2 192 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms