RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FUT11Q495W5 492 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 PAGE3Q5JUK9 113 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 PTRH1Q86Y79 214 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 ATAD1Q8NBU5 361 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 ADAMTS16Q8TE57 1224 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 CYGBQ8WWM9 190 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 FUBP1Q96AE4 644 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 BIRC8Q96P09 236 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 TRIB3Q96RU7 358 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 NUSAP1Q9BXS6 441 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 C8orf4Q9NR00 106 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 GALNT8Q9NY28 637 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 FAM92AA1XBS5 289 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 CCDC154A6NI56 674 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 SOAT2O75908 522 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 ESRRBO95718 433 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 CHEK2O96017 543 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 OR1G1P47890 313 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 ZFP36L2P47974 494 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 MRPL19P49406 292 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 ZNF140P52738 457 aaPredicted RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 ZBED5Q49AG3 693 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 EFL1Q7Z2Z2 1120 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 SYVN1Q86TM6 617 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 PXYLP1Q8TE99 480 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 SEPT8Q92599 483 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 GPR21Q99679 349 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 HMX1Q9NP08 348 aaPredicted RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 TLR8Q9NR97 1041 aaKnown RBP15.24■□□□□ 0.03
BRCC3-201ENST00000330045 CIDEBQ9UHD4 219 aa15.24■□□□□ 0.03
BRCC3-201ENST00000330045 CROCCQ5TZA2 2017 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TCRBV5S2A0A599 114 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TYW5A2RUC4 315 aaKnown RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 NPEPPSL1A6NEC2 478 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 MOXD2PA6NHM9 499 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 BTN3A1O00481 513 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 STX16O14662 325 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 EI24O14681 340 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 EEDO75530 441 aaKnown RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 SLC22A3O75751 556 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 IGLV3-27P01718 113 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 UROSP10746 265 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 NCK1P16333 377 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 RFC2P35250 354 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 MAGEA11P43364 429 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 AGTR2P50052 363 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 EMP3P54852 163 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 NAA20P61599 178 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 UFM1P61960 85 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TAF10Q12962 218 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 ACBD5Q5T8D3 534 aaPredicted RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 ALG1LQ6GMV1 187 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 NADSYN1Q6IA69 706 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 AFTPHQ6ULP2 937 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 GLB1LQ6UWU2 654 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 CLVS1Q8IUQ0 354 aaPredicted RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 BBS5Q8N3I7 341 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 NKAPQ8N5F7 415 aaKnown RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 OR4K2Q8NGD2 314 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 RNF217Q8TC41 542 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 PHF12Q96QT6 1004 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 HGH1Q9BTY7 390 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 C1QTNF3Q9BXJ4 246 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 MUC3BQ9H195 1237 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 CD320Q9NPF0 282 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 STARD7Q9NQZ5 370 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 LEF1Q9UJU2 399 aaPredicted RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 ZNF225Q9UK10 706 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TRIM17Q9Y577 477 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 SPO11Q9Y5K1 396 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 ACTL7AQ9Y615 435 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 A0A0D9SEW6 157 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 KANSL1LA0AUZ9 987 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TRIM64A6NGJ6 449 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 CLOCKO15516 846 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 SNX2O60749 519 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 MLYCDO95822 493 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 UMPSP11172 480 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 SOX11P35716 441 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 CASP2P42575 452 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 POLR2JP52435 117 aaKnown RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 AASDHQ4L235 1098 aaPredicted RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 XKR7Q5GH72 579 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TXNDC11Q6PKC3 985 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 SCIMPQ6UWF3 145 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 GLT6D1Q7Z4J2 308 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TBC1D21Q8IYX1 336 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 TMEM199Q8N511 208 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 GFM2Q969S9 779 aaKnown RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 RMDN1Q96DB5 314 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 RPL10LQ96L21 214 aaKnown RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 BRINP2Q9C0B6 783 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 GALPQ9UBC7 116 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 ANAPC2Q9UJX6 822 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 PCTPQ9UKL6 214 aa15.23■□□□□ 0.03
BRCC3-201ENST00000330045 PRG3Q9Y2Y8 225 aaPredicted RBP15.23■□□□□ 0.03
BRCC3-201ENST00000330045 ENPP3O14638 875 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 GIPC1O14908 333 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms