RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 G3V2T6 193 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 XPNPEP2O43895 674 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 MT-CYBP00156 380 aaPredicted RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ENO2P09104 434 aaPredicted RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ADRA1BP35368 520 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 TPI1P60174 286 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 NFKB2Q00653 900 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 EMX2Q04743 252 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 EPS8Q12929 822 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 KIAA0930Q6ICG6 404 aaPredicted RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 SULT1C3Q6IMI6 304 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ISCA2Q86U28 154 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ZDHHC13Q8IUH4 622 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 POC5Q8NA72 575 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 BEST2Q8NFU1 509 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 CARS2Q9HA77 564 aaKnown RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 MID1IP1Q9NPA3 183 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 USE1Q9NZ43 259 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 TBC1D14Q9P2M4 693 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 UGT2A1Q9Y4X1 527 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 LRRC14BA6NHZ5 514 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 PSMD3O43242 534 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 DLGAP3O95886 979 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 CCDC159P0C7I6 412 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 LINC00032P0C843 101 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 MAP2K4P45985 399 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 KCNK10P57789 538 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ADIGQ0VDE8 80 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ZNF181Q2M3W8 571 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 TTC23LQ6PF05 361 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 UNC93AQ86WB7 457 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 SVOPQ8N4V2 548 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 PNPLA1Q8N8W4 532 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 RORBQ92753 470 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 WNT8BQ93098 351 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 ZNF566Q969W8 418 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 MARCH7Q9H992 704 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 MAGEL2Q9UJ55 1249 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 OSGIN1Q9UJX0 560 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 BTRCQ9Y297 605 aa12.69□□□□□ -0.38
CCDC60-201ENST00000327554 TYW5A2RUC4 315 aaKnown RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 TBX1O43435 398 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SIX3O95343 332 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 TGFBR1P36897 503 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SEPHS1P49903 392 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 CLCN5P51795 746 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 FAM187BQ17R55 369 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 DESI1Q6ICB0 168 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 PRR23BQ6ZRT6 265 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SLC22A15Q8IZD6 547 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 FAM86B1Q8N7N1 296 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 IPMKQ8NFU5 416 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 FBLIM1Q8WUP2 373 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 PTERQ96BW5 349 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 FICDQ9BVA6 458 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 ASPSCR1Q9BZE9 553 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 OR2B2Q9GZK3 357 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 POLR3BQ9NW08 1133 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 ERVK-18Q9QC07 812 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 EVLQ9UI08 416 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 EIF3LQ9Y262 564 aaKnown RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 LOC100130705A0A1B0GUX0 176 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 ZBBXA8MT70 800 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 AREL1O15033 823 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 IDH3BO43837 385 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 BMP1P13497 986 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 ARF4P18085 180 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 CASP2P42575 452 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 CDK5R2Q13319 367 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SELPLGQ14242 412 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 NKG7Q16617 165 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 FAM98BQ52LJ0 330 aaKnown RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SYT6Q5T7P8 510 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 HECTD2Q5U5R9 776 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 UBE2UQ5VVX9 321 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 ITFG1Q8TB96 612 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SLC2A14Q8TDB8 520 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 MCOLN3Q8TDD5 553 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 ZNF419Q96HQ0 510 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms