RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GPR180Q86V85 440 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 CILP2Q8IUL8 1156 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 HID1Q8IV36 788 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 AMER2Q8N7J2 671 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ARL10Q8N8L6 244 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 UTP15Q8TED0 518 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 A0A0G2JLL6 359 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 LOC100506127A0A0U1RQW1 187 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 NOBOXO60393 691 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 NDST3O95803 873 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SPATA31D3P0C874 917 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SMPD1P17405 629 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC26A3P40879 764 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 DIO3P55073 304 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC10A7Q0GE19 358 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 PAQR3Q6TCH7 311 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 PRRT2Q7Z6L0 340 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 HEATR4Q86WZ0 1026 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 OR10A6Q8NH74 314 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 MCFD2Q8NI22 146 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 KCNN1Q92952 543 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 BHMTQ93088 406 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 MTFMTQ96DP5 389 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ERLEC1Q96DZ1 483 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 TPD52L3Q96J77 140 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 TRIM43BA6NCK2 446 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 NME4O00746 187 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 NDUFS2O75306 463 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 CLPXO76031 633 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 DBTP11182 482 aaKnown RBP12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 MYF6P23409 242 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 INAQ16352 499 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 CRY1Q16526 586 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 SPANXN2Q5MJ10 180 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 DLK2Q6UY11 383 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 GALNT5Q7Z7M9 940 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 OR8H2Q8N162 312 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 SPPL2AQ8TCT8 520 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 TSGA13Q96PP4 275 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 TMEM209Q96SK2 561 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 OLFM1Q99784 485 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 ADAMTS10Q9H324 1103 aa12.65□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF195O14628 629 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 RASAL1O95294 804 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 CAPN1P07384 714 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF26P17031 533 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 PCSK6P29122 969 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ALDH4A1P30038 563 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 MC4RP32245 332 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 KPNA1P52294 538 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 GRB7Q14451 532 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 RBM48Q5RL73 367 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF621Q6ZSS3 439 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 HIPK1Q86Z02 1210 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ARRDC4Q8NCT1 418 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 OR13C4Q8NGS5 318 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 MUS81Q96NY9 551 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ARMC1Q9NVT9 282 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 DNAJB9Q9UBS3 223 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 CAPN15O75808 1086 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ARRB2P32121 409 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 PIK3CGP48736 1102 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 UFM1P61960 85 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 MRPS6P82932 125 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ECT2LQ008S8 904 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 LRRC74AQ0VAA2 488 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 LRP8Q14114 963 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 MINDY1Q8N5J2 469 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 SELENOMQ8WWX9 145 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ACBD6Q9BR61 282 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 TDRD1Q9BXT4 1180 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 CCNB1IP1Q9NPC3 277 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 GIT1Q9Y2X7 761 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 NFKBIEO00221 500 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 CDK14O94921 469 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 MFN2O95140 757 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 C7P10643 843 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 OGNP20774 298 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 HALP42357 657 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 TBC1D25Q3MII6 688 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 RNF111Q6ZNA4 994 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ZC3H7AQ8IWR0 971 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 CMTR2Q8IYT2 770 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ALDH16A1Q8IZ83 802 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 BRSK1Q8TDC3 778 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 CAPSLQ8WWF8 208 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms