RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 NEDD8Q15843 81 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 LY6G5CQ5SRR4 150 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 SDE2Q6IQ49 451 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 NET1Q7Z628 596 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-201ENST00000321105 HORMAD1Q86X24 394 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF614Q8N883 585 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 ANKRD49Q8WVL7 239 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 EBPLQ9BY08 206 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 MIEF1Q9NQG6 463 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 TLR9Q9NR96 1032 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 LNPEPQ9UIQ6 1025 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
TOP3A-201ENST00000321105 PPP6CO00743 305 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 OAZ2O95190 189 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 PLCL1Q15111 1095 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 TEAD2Q15562 447 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF648Q5T619 568 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 CATSPER1Q8NEC5 780 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 AP2M1Q96CW1 435 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SLC22A12Q96S37 553 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 RTP3Q9BQQ7 232 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ALG2Q9H553 416 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 HCFC1R1Q9NWW0 138 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 DEC1Q9P2X7 70 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 PADI4Q9UM07 663 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 COPG1Q9Y678 874 aaKnown RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 MYO10Q9HD67 2058 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SEC16AO15027 2179 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 COL11A2P13942 1736 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 COL24A1Q17RW2 1714 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 CATP04040 527 aaKnown RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 DGKQP52824 942 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SGCGQ13326 291 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 HIST2H2ACQ16777 129 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 C2orf27AQ580R0 203 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 HIST2H2AA3Q6FI13 130 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 CYP4V2Q6ZWL3 525 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF534Q76KX8 674 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 CFAP206Q8IYR0 622 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 APCDD1Q8J025 514 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 MIPEPQ99797 713 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SIKE1Q9BRV8 207 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 RNF38Q9H0F5 515 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 CRISPLD1Q9H336 500 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 TRPC4Q9UBN4 977 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF212Q9UDV6 495 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF490Q9ULM2 529 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SORCS3Q9UPU3 1222 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 PRAMEF11O60813 436 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ECI2O75521 394 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 COX7A2P14406 83 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 RGRP47804 291 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 APLP1P51693 650 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 CDKN2DP55273 166 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ATP6V0D1P61421 351 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SQLEQ14534 574 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 PSAPL1Q6NUJ1 521 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 Q6ZVL8 140 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 RRM2BQ7LG56 351 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF513Q8N8E2 541 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ITFG1Q8TB96 612 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 RDH11Q8TC12 318 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 SLC7A6OSQ96CW6 309 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 FAM83DQ9H4H8 585 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 PNPLA8Q9NP80 782 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 DYRK1BQ9Y463 629 aa10.91□□□□□ -0.66
TOP3A-201ENST00000321105 ATXN2Q99700 1313 aaKnown RBP10.91□□□□□ -0.66
TOP3A-201ENST00000321105 M0QZQ0 153 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 SAP18O00422 153 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 RGS14O43566 566 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 RNASEH1O60930 286 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 SLC22A3O75751 556 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 MLYCDO95822 493 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ALOX15P16050 662 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 CKMT2P17540 419 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 PAX3P23760 479 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 CHI3L1P36222 383 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 CCNHP51946 323 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 CCDC15Q0P6D6 951 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 PM20D1Q6GTS8 502 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ARHGAP12Q8IWW6 846 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 BEND7Q8N7W2 519 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 OR52E6Q96RD3 313 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 DOCK5Q9H7D0 1870 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 AKTIPQ9H8T0 292 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 TMEM248Q9NWD8 314 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ZNF711Q9Y462 761 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 A0A0G2JN53 185 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 CLOCKO15516 846 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 STATHP02808 62 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 COL6A2P12110 1019 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 DIO3P55073 304 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 SEC13P55735 322 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 MTPNP58546 118 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 LCP2Q13094 533 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 C6orf52Q5T4I8 152 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 RNF220Q5VTB9 566 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms