RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SIDT2Q8NBJ9 832 aaKnown RBP17.67■□□□□ 0.42
RAB39A-201ENST00000320578 GIMAP7Q8NHV1 300 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 PPM1EQ8WY54 764 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 RILPQ96NA2 401 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 SLC30A3Q99726 388 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 C1QTNF3Q9BXJ4 246 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 COG4Q9H9E3 785 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 THAP10Q9P2Z0 257 aaPredicted RBP17.67■□□□□ 0.42
RAB39A-201ENST00000320578 GALPQ9UBC7 116 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 CDH22Q9UJ99 828 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 PPM1HQ9ULR3 514 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 MTF2Q9Y483 593 aaPredicted RBP17.67■□□□□ 0.42
RAB39A-201ENST00000320578 NUMBLQ9Y6R0 609 aa17.67■□□□□ 0.42
RAB39A-201ENST00000320578 A8MX80 341 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 H0Y858 1186 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 STX16-NPEPL1H3BU86 382 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 STX16O14662 325 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 XPAP23025 273 aaPredicted RBP17.66■□□□□ 0.42
RAB39A-201ENST00000320578 ITGB7P26010 798 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 MESP2Q0VG99 397 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 SEL1L3Q68CR1 1132 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 NUDT18Q6ZVK8 323 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 TTC7BQ86TV6 843 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 NRSN1Q8IZ57 195 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 COPS8Q99627 209 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 EBF4Q9BQW3 602 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 PLA2G2FQ9BZM2 168 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 NMUR2Q9GZQ4 415 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 FAM83DQ9H4H8 585 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 SUN2Q9UH99 717 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 ZDHHC2Q9UIJ5 367 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 CAPN7Q9Y6W3 813 aa17.66■□□□□ 0.42
RAB39A-201ENST00000320578 CAPN14A8MX76 684 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 EIF3FO00303 357 aaPredicted RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 GPR39O43194 453 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 MPSTP25325 297 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 CA5AP35218 305 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 MMP12P39900 470 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 GRIA2P42262 883 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 RGS4P49798 205 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 RALGDSQ12967 914 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 ZNF234Q14588 700 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 TXNDC11Q6PKC3 985 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 ALYREFQ86V81 257 aaKnown RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 AFAP1L2Q8N4X5 818 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 TRAM1L1Q8N609 369 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 FUBP1Q96AE4 644 aaKnown RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 LINGO1Q96FE5 620 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 NSL1Q96IY1 281 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 PANX3Q96QZ0 392 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 BOCQ9BWV1 1114 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 LRMDAQ9H2I8 198 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 GSTO2Q9H4Y5 243 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 ARHGEF3Q9NR81 526 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 SPATS2LQ9NUQ6 558 aaKnown RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 RNF112Q9ULX5 631 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 BPTFQ12830 3046 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 HGSO14964 777 aaPredicted RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 NPC1O15118 1278 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 GRID2O43424 1007 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 CBSLP0DN79 551 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 DGKAP23743 735 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 CBSP35520 551 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 KDSRQ06136 332 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 COL19A1Q14993 1142 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 ITPRIPL2Q3MIP1 535 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 UNC50Q53HI1 259 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 GPRC6AQ5T6X5 926 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 MTSS1LQ765P7 747 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 TECPR1Q7Z6L1 1165 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 SUGP1Q8IWZ8 645 aaKnown RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 EEF1AKMT1Q8WVE0 214 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 KLHL29Q96CT2 875 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 PHF21BQ96EK2 531 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 PTCD3Q96EY7 689 aaKnown RBP17.65■□□□□ 0.42
RAB39A-201ENST00000320578 CCDC28BQ9BUN5 200 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 MTG2Q9H4K7 406 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 CYP4F12Q9HCS2 524 aa17.65■□□□□ 0.42
RAB39A-201ENST00000320578 MUC22E2RYF6 1773 aaPredicted RBP17.64■□□□□ 0.42
RAB39A-201ENST00000320578 PRRC2BQ5JSZ5 2229 aaKnown RBP17.64■□□□□ 0.41
RAB39A-201ENST00000320578 TRPC5OSA6NMA1 111 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 MAGEC1O60732 1142 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 CALB2P22676 271 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 ELP6Q0PNE2 266 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 TTLL9Q3SXZ7 439 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 PARS2Q7L3T8 475 aaKnown RBP17.64■□□□□ 0.41
RAB39A-201ENST00000320578 HSD11B1LQ7Z5J1 315 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 DSG4Q86SJ6 1040 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 ADAMTSL2Q86TH1 951 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 CPNE9Q8IYJ1 553 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 PTGR2Q8N8N7 351 aaPredicted RBP17.64■□□□□ 0.41
RAB39A-201ENST00000320578 FAM136AQ96C01 138 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 PPP1R16AQ96I34 528 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 NECTIN4Q96NY8 510 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 ZSCAN5AQ9BUG6 496 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.41
RAB39A-201ENST00000320578 CCDC106Q9BWC9 280 aa17.64■□□□□ 0.41
RAB39A-201ENST00000320578 ZNF576Q9H609 170 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms