RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZNF697Q5TEC3 545 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 SLC9A4Q6AI14 798 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 UNC5AQ6ZN44 842 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 MAGEE2Q8TD90 523 aaPredicted RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF358Q9NW07 568 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ZDHHC7Q9NXF8 308 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PRKYO43930 277 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 C4BPAP04003 597 aaKnown RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ACCSLQ4AC99 568 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ATXN7L2Q5T6C5 722 aaPredicted RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ACDQ96AP0 544 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 AASSQ9UDR5 926 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 SH3D21A4FU49 640 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 C2CD4BA6NLJ0 364 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PRPS1L1P21108 318 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 DDX6P26196 483 aaKnown RBP eCLIP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 GSTM2P28161 218 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 GAS6Q14393 721 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PCSK7Q16549 785 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 KLHL26Q53HC5 615 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CHSY3Q70JA7 882 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PJA1Q8NG27 643 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CYP2S1Q96SQ9 504 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 GLOD4Q9HC38 313 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 POLLQ9UGP5 575 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 RUVBL1Q9Y265 456 aaKnown RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 TRIM17Q9Y577 477 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PCDHA2Q9Y5H9 948 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 A0A1W2PP18 115 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PITPNM1O00562 1244 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 STK16O75716 305 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 UGT2B17O75795 530 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CD40LGP29965 261 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 C5orf22Q49AR2 442 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF773Q6PK81 442 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 FAM131BQ86XD5 332 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 NAT8LQ8N9F0 302 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 OR5K1Q8NHB7 308 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 FCRL5Q96RD9 977 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 HNRNPABQ99729 332 aaKnown RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CCDC32Q9BV29 185 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 REXO4Q9GZR2 422 aaKnown RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 RFXANKO14593 260 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 SLC6A4P31645 630 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PLCZ1Q86YW0 608 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 FAM47BQ8NA70 645 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CPVLQ9H3G5 476 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 MED11Q9P086 117 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 DNM1LO00429 736 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 FGBP02675 491 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 HMGN1P05114 100 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 YES1P07947 543 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 NOS3P29474 1203 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 ADRA1BP35368 520 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 HALP42357 657 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 NEDD8Q15843 81 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 IL17AQ16552 155 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 VWA5B1Q5TIE3 1220 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 DENND1AQ8TEH3 1009 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PLEKHG4BQ96PX9 1271 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 TMEM209Q96SK2 561 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 YME1L1Q96TA2 773 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 FAM172BPA6NC97 362 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 LACTBL1A8MY62 500 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 H3BN98 237 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PTTG1O95997 202 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CXCL8P10145 99 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 F8A1P23610 371 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 IGFBP5P24593 272 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 MAPK3P27361 379 aaPredicted RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 DCKP27707 260 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PSMB4P28070 264 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 HEPACAMQ14CZ8 416 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CDCA2Q69YH5 1023 aaPredicted RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 SLC2A14Q8TDB8 520 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 GEMIN6Q8WXD5 167 aaKnown RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CPT1BQ92523 772 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 NMRK2Q9NPI5 230 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 TRPV5Q9NQA5 729 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 EHD3Q9NZN3 535 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PARP14Q460N5 1801 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 MYLKQ15746 1914 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 F8VP50 259 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 TOP3BO95985 862 aaKnown RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 INSRRP14616 1297 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 UBA1P22314 1058 aaKnown RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 CDC25CP30307 473 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 DNAJA1P31689 397 aaKnown RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 SLC7A2P52569 658 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 KCNJ11Q14654 390 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 TAF1AQ15573 450 aaPredicted RBP8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PCDHGB5Q9Y5G0 923 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 SH3PXD2BA1X283 911 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 DUXAA6NLW8 204 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 PET100P0DJ07 73 aa8.76□□□□□ -1.01
COL6A5-202ENST00000312481 SLITRK4Q8IW52 837 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms