RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ATP6AP2A0A1C7CYW4 349 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 H0Y858 1186 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SMIM22K7EJ46 135 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TOR1BO14657 336 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 AVILO75366 819 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ATP6AP2O75787 350 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 HNRNPLP14866 589 aaKnown RBP eCLIP8.14□□□□□ -1.116e-15■■■■■ 32.5
VPS41-202ENST00000310301 NDST1P52848 882 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 IL2P60568 153 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 RPL38P63173 70 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 WDR59Q6PJI9 974 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 P2RY8Q86VZ1 359 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PSTKQ8IV42 348 aaKnown RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 DSELQ8IZU8 1212 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 OR2T34Q8NGX1 318 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 OR2T3Q8NH03 318 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 HM13Q8TCT9 377 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SLC35C1Q96A29 364 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 FAM126AQ9BYI3 521 aaPredicted RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 IL22Q9GZX6 179 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 UCKL1Q9NWZ5 548 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ADGRE2Q9UHX3 823 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 MAGEL2Q9UJ55 1249 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PAPPA2Q9BXP8 1791 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 H0YGN5 161 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ITGA2BP08514 1039 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 EPORP19235 508 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TNNI3P19429 210 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ARL2P36404 184 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 HNF4AP41235 474 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 OR2B6P58173 313 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PRR23BQ6ZRT6 265 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SCUBE3Q8IX30 993 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 IQCF2Q8IXL9 164 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 SPATA6LQ8N4H0 392 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TEX47Q8TBZ9 253 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 TMEM159Q96B96 161 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 FBXL18Q96ME1 805 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ACE2Q9BYF1 805 aaPredicted RBP8.14□□□□□ -1.11
VPS41-202ENST00000310301 NFKBIZQ9BYH8 718 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 PRDM12Q9H4Q4 367 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 ARL15Q9NXU5 204 aa8.14□□□□□ -1.11
VPS41-202ENST00000310301 CCDC189A1A4V9 331 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 BTNL10A8MVZ5 291 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 FFAR3O14843 346 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 GPR42O15529 346 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 BMP10O95393 424 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 MLYCDO95822 493 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 NUDT14O95848 222 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 EDNRBP24530 442 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PRKAG1P54619 331 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 POLR2LP62875 67 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 DEFA5Q01523 94 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ADIGQ0VDE8 80 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 KLF10Q13118 480 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 GNA13Q14344 377 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 IQCKQ8N0W5 287 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 HDDC3Q8N4P3 179 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 TMEM161BQ8NDZ6 487 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 RDH11Q8TC12 318 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PIK3R3Q92569 461 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 FRMD6Q96NE9 622 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 MRPL57Q9BQC6 102 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 NLNQ9BYT8 704 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 TRIT1Q9H3H1 467 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 OSGEPL1Q9H4B0 414 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 CORO2BQ9UQ03 480 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PLK4O00444 970 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 INPPL1O15357 1258 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 LAMTOR5O43504 91 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 CNMDO75829 334 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 KDM4BO94953 1096 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SOD2P04179 222 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 CYP1A2P05177 515 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PGRP06401 933 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 OR56A5P0C7T3 313 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SMIM11AP58511 58 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SMAD3P84022 425 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 GAD2Q05329 585 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 CRY1Q16526 586 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PCID2Q5JVF3 399 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ZNF662Q6ZS27 426 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PPP3R2Q96LZ3 170 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 BTBD9Q96Q07 612 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 HOPXQ9BPY8 73 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 OSBPL7Q9BZF2 842 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ACSS3Q9H6R3 686 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PNPLA8Q9NP80 782 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PRDM8Q9NQV8 689 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SMPD3Q9NY59 655 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 EMC3Q9P0I2 261 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 EIF3KQ9UBQ5 218 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 SNX6Q9UNH7 406 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 NCANO14594 1321 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 NRP1O14786 923 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 IGSF6O95976 241 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ITGAVP06756 1048 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms