RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PEX12O00623 359 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 TGM5O43548 720 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CYP4F3Q08477 520 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 HNRNPDQ14103 355 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 ACAP2Q15057 778 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 LRRTM4Q86VH4 590 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 POU5F2Q8N7G0 328 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 IPCEF1Q8WWN9 437 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 EXOSC8Q96B26 276 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 C8orf33Q9H7E9 229 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 AP3D1O14617 1153 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CLDN9O95484 217 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 SYPP08247 313 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 FASP25445 335 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 NMBRP28336 390 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 IRAK1P51617 712 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 RCN1Q15293 331 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 RNASEH2BQ5TBB1 312 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 C10orf107Q8IVU9 208 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 RAD51AP1Q96B01 352 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 OXNAD1Q96HP4 312 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 OR52E6Q96RD3 313 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF607Q96SK3 696 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 BDH2Q9BUT1 245 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PHF24Q9UPV7 400 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 RFXANKO14593 260 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 TPSB2P20231 275 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 TPSAB1Q15661 275 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 MLIPQ5VWP3 458 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SNX32Q86XE0 403 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC43A3Q8NBI5 491 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 CLHC1Q8NHS4 586 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 HCAR2Q8TDS4 363 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 OLFM3Q96PB7 478 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ADAMTS10Q9H324 1103 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 RHOJQ9H4E5 214 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 RXFP1Q9HBX9 757 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 MIOSQ9NXC5 875 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 PCDHB3Q9Y5E6 796 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 UPK3BL1B0FP48 263 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 UPK3BL2E5RIL1 263 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 TEX28O15482 410 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 HSPA7P48741 367 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 CPTPQ5TA50 214 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 DUPD1Q68J44 220 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SNX20Q7Z614 316 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC9B2Q86UD5 537 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 MICU2Q8IYU8 434 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 FBXO30Q8TB52 745 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SMARCD2Q92925 531 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 PRICKLE1Q96MT3 831 aaPredicted RBP10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ZSCAN5AQ9BUG6 496 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 TRBC1P01850 177 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 RPL10P27635 214 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ACVRL1P37023 503 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 CCNFP41002 786 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 MAPK12P53778 367 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 RPP38P78345 283 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 BEND5Q7L4P6 421 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 UBR7Q8N806 425 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 MAPK15Q8TD08 544 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ADAMTS15Q8TE58 950 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 OVCA2Q8WZ82 227 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 DNASE1L2Q92874 299 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SPHK2Q9NRA0 654 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 APOA1P02647 267 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 C8GP07360 202 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 PIK3R1P27986 724 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 CYP2R1Q6VVX0 501 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 HFE2Q6ZVN8 426 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ABHD13Q7L211 337 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 CMC1Q7Z7K0 106 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 RNF148Q8N7C7 305 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SMG8Q8ND04 991 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 HERC2P3Q9BVR0 1158 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 CDADC1Q9BWV3 514 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SMOC2Q9H3U7 446 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 REEP1Q9H902 201 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ANAPC2Q9UJX6 822 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 TMEM98Q9Y2Y6 226 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 TCRBV9S1A1TA0A576 114 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 AZIN1O14977 448 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 NOL4O94818 638 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC6A2P23975 617 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 MS4A13Q5J8X5 152 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 OR2AP1Q8NGE2 309 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 HLA-CQ95604 372 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
SYNPO2-201ENST00000307142 SAC3D1A6NKF1 404 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RGS5O15539 181 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM20BO75063 409 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 SHBGP04278 402 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ARCN1P48444 511 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 GTF2H2Q13888 395 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 SQLEQ14534 574 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 PLEKHG6Q3KR16 790 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 GTF2H2CQ6P1K8 395 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RDH11Q8TC12 318 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms