RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 HEXDCQ8WVB3 486 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SCARF2Q96GP6 870 aaPredicted RBP10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TTC1Q99614 292 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TRIM51Q9BSJ1 452 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TUBB2BQ9BVA1 445 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CLPBQ9H078 707 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A7Q9HAW7 530 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A10Q9HAW8 530 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A8Q9HAW9 530 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SYBUQ9NX95 663 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SIRPGQ9P1W8 387 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CDC23Q9UJX2 597 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 RIMKLBQ9ULI2 386 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GPR34Q9UPC5 381 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MROH6A6NGR9 719 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 EFCAB8A8MWE9 144 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 B4DGG1 531 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SMAPO00193 183 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TRIM38O00635 465 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GAPDHSO14556 408 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 KMOO15229 486 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 YY2O15391 372 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MLNP12872 115 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ACP5P13686 325 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CKMT2P17540 419 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 VCLP18206 1134 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PPARGP37231 505 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ACTR1BP42025 376 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PTGIRP43119 386 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ACTR1AP61163 376 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CRADDP78560 199 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 XIAPP98170 497 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CACNG1Q06432 222 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 BIRC2Q13490 618 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NR0B2Q15466 257 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PLA2G4EQ3MJ16 856 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GPR33Q49SQ1 333 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CCDC157Q569K6 752 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF648Q5T619 568 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 RNASEH2BQ5TBB1 312 aaKnown RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ARMC3Q5W041 872 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SLC30A9Q6PML9 568 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF534Q76KX8 674 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CHST15Q7LFX5 561 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TAS2R42Q7RTR8 314 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GLRX5Q86SX6 157 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 OTUD6BQ8N6M0 293 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ARL10Q8N8L6 244 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NAT8LQ8N9F0 302 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 FAM181AQ8N9Y4 354 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 FAM46DQ8NEK8 389 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 OR6P1Q8NGX9 317 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GPBAR1Q8TDU6 330 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SNF8Q96H20 258 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CDKN2AIPNLQ96HQ2 116 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 APOLD1Q96LR9 279 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SERPINB12Q96P63 405 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 COPS8Q99627 209 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TRIM31Q9BZY9 425 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 OSGEPL1Q9H4B0 414 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CAAP1Q9H8G2 361 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MRM3Q9HC36 420 aaKnown RBP10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GULP1Q9UBP9 304 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ANAPC5Q9UJX4 755 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF292O60281 2723 aa10.87□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PTPRBP23467 1997 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DNAH14Q0VDD8 3507 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 RFPL3O75679 317 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GOT2P00505 430 aaKnown RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 FTH1P19P0C7X4 201 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GIMD1P0DJR0 217 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SLC2A4P14672 509 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ACRV1P26436 265 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 AK4P27144 223 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CTBSQ01459 385 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DNAJC3Q13217 504 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PROX2Q3B8N5 592 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 FASTKD1Q53R41 847 aaKnown RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DNAJC21Q5F1R6 531 aaKnown RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 AARS2Q5JTZ9 985 aaKnown RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 LYPLAL1Q5VWZ2 237 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NXPE1Q8N323 547 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 BBOF1Q8ND07 529 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MNS1Q8NEH6 495 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 OR13J1Q8NGT2 312 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CCL4L1Q8NHW4 92 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZDHHC1Q8WTX9 485 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NAT6Q93015 286 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 HDAC10Q969S8 669 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF514Q96K75 400 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TIMM29Q9BSF4 260 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 BOCQ9BWV1 1114 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 RAB17Q9H0T7 212 aa10.86□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 FAM96AQ9H5X1 160 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms