RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PTPN18Q99952 460 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 MRPL46Q9H2W6 279 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 GLOD4Q9HC38 313 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SLC6A13Q9NSD5 602 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 AIG1Q9NVV5 245 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 BFARQ9NZS9 450 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 GMIPQ9P107 970 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 MARCH4Q9P2E8 410 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 IFT80Q9P2H3 777 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 EVLQ9UI08 416 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 RUVBL2Q9Y230 463 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 TIMM22Q9Y584 194 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 FAM95CA0A1B0GW59 222 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SLC16A6O15403 523 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SYNCRIPO60506 623 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 HUS1O60921 280 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 MT-CYBP00156 380 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 SPNP16150 400 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ATP5F1P24539 256 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 HERVK_113P63132 956 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 MRPS6P82932 125 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 MAPRE1Q15691 268 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 PLA2G4EQ3MJ16 856 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CLEC6AQ6EIG7 209 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 METTL2BQ6P1Q9 378 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 C17orf99Q6UX52 265 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 Q6ZSR9 355 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CLVS1Q8IUQ0 354 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 RTL3Q8N8U3 475 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 SLC43A3Q8NBI5 491 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 KLHDC9Q8NEP7 349 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ARRDC2Q8TBH0 407 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 FUBP3Q96I24 572 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS50-202ENST00000305866 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 GLT1D1Q96MS3 346 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ZNF583Q96ND8 569 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ZNF347Q96SE7 839 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PARK7Q99497 189 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 ERVK-6Q9BXR3 956 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SLC25A51Q9H1U9 297 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 DUSP21Q9H596 190 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SLC25A37Q9NYZ2 338 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 FLRT1Q9NZU1 646 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 STOML2Q9UJZ1 356 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 TLR6Q9Y2C9 796 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 MUC22E2RYF6 1773 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 LAMA2P24043 3122 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 SERTM1A2A2V5 107 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 TRPC5OSA6NMA1 111 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ABCB7O75027 752 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GPC4O75487 556 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 HPRP00739 348 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 HLA-DQB2P05538 268 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 MTHFD1P11586 935 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 TPH1P17752 444 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 IL1RNP18510 177 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CES1P23141 567 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PRDX3P30048 256 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 NRIP1P48552 1158 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GSK3BP49841 420 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CLCN5P51795 746 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GEMP55040 296 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 OR4D2P58180 307 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 RING1Q06587 406 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 IFRD2Q12894 506 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 FASTKQ14296 549 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 ARL13BQ3SXY8 428 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 NOMO2Q5JPE7 1267 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SAMD4BQ5PRF9 694 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 ZNF691Q5VV52 312 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SPRYD7Q5W111 196 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CYP2R1Q6VVX0 501 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SCD5Q86SK9 330 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SNX29P2Q8IUI4 249 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 LACC1Q8IV20 430 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 OFCC1Q8IZS5 231 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PIK3C3Q8NEB9 887 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 OR6B3Q8NGW1 331 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PNPT1Q8TCS8 783 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 ZFP90Q8TF47 636 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ATXN7L3BQ96GX2 97 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SPATA17Q96L03 361 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 TBL1YQ9BQ87 522 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 HAUS8Q9BT25 410 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 FUNDC2Q9BWH2 189 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 RSPO3Q9BXY4 272 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 CHST8Q9H2A9 424 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 Q9H521 79 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SMPD4Q9NXE4 827 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 KLHL3Q9UH77 587 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PCDHB8Q9UN66 801 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 MN1Q10571 1320 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 M0QYT0 321 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CLDN5O00501 218 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 DSCR3O14972 297 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 SUPT3HO75486 399 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GJB3O75712 270 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 DDNO94850 711 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 SUPT7LO94864 414 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms