RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 AKR1A1P14550 325 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 ZNF10P21506 573 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 L1CAMP32004 1257 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 CCNIQ14094 377 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 FRMD7Q6ZUT3 714 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 FAM220AQ7Z4H9 259 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 PYROXD2Q8N2H3 581 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 ZBTB8BQ8NAP8 495 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 IPCEF1Q8WWN9 437 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 COPS8Q99627 209 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 GPR21Q99679 349 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 IPPKQ9H8X2 491 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 PTBP2Q9UKA9 531 aaKnown RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 GSAPA4D1B5 854 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 C9JVG2 144 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 CXCR6O00574 342 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 TPD52L2O43399 206 aaKnown RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 TCEAL1Q15170 157 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 DPYSL2Q16555 572 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 SLC9A4Q6AI14 798 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 C16orf62Q7Z3J2 963 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 CMASQ8NFW8 434 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 OR4K2Q8NGD2 314 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 MAFBQ9Y5Q3 323 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-201ENST00000304636 ZNF536O15090 1300 aa12.76□□□□□ -0.37
COL3A1-201ENST00000304636 ADAMDEC1O15204 470 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CHST10O43529 356 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 VNN1O95497 513 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CKMT2P17540 419 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 WEE1P30291 646 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 PFKPQ01813 784 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 DAG1Q14118 895 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TMPRSS11AQ6ZMR5 421 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 DENND1CQ8IV53 801 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 SMYD1Q8NB12 490 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 SKA1Q96BD8 255 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 EXOC2Q96KP1 924 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 FEM1AQ9BSK4 669 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 BRD9Q9H8M2 597 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CACNA1FO60840 1977 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CXorf49A8MYA2 514 aaPredicted RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 PCDH8O95206 1070 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ASMTP46597 345 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 BCAP31P51572 246 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 EEFSECP57772 596 aaKnown RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 MTAPQ13126 283 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 UBE2R2Q712K3 238 aaPredicted RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 SEC14L1Q92503 715 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 APOLD1Q96LR9 279 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 MTIF3Q9H2K0 278 aaKnown RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 FADS2P1A8MWK0 482 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 AP3D1O14617 1153 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 UGT2B17O75795 530 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 NDST3O95803 873 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 LINGO3P0C6S8 592 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CDH1P12830 882 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 HNF4AP41235 474 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TAS2R39P59534 338 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 IRF9Q00978 393 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ZNF460Q14592 562 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 PPM1LQ5SGD2 360 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 FAM151BQ6UXP7 276 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 OR10A6Q8NH74 314 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 SPATA22Q8NHS9 363 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 PKP2Q99959 881 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ASPAP45381 313 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 STARP49675 285 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CRYBB1P53674 252 aaPredicted RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 KIAA0930Q6ICG6 404 aaPredicted RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 EPGNQ6UW88 154 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 MPP5Q8N3R9 675 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 GLB1L3Q8NCI6 653 aaPredicted RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 DNAJB8Q8NHS0 232 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CSGALNACT1Q8TDX6 532 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 DQX1Q8TE96 717 aaKnown RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TBATAQ96M53 351 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 MAGEE1Q9HCI5 957 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TBCCD1Q9NVR7 557 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 GIT1Q9Y2X7 761 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 FAM234BA2RU67 622 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ARHGEF33A8MVX0 844 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TOR1BO14657 336 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 CLDN9O95484 217 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 AMHP03971 560 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 PGRP06401 933 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 GTF2E2P29084 291 aaKnown RBP12.75□□□□□ -0.37
COL3A1-201ENST00000304636 ARPC4P59998 168 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 C17orf50Q8WW18 174 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 OR52B2Q96RD2 323 aa12.75□□□□□ -0.37
COL3A1-201ENST00000304636 TM6SF2Q9BZW4 377 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms