RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 VPS35Q96QK1 796 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 TRIM5Q9C035 493 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 OR2AG1Q9H205 316 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 UCK1Q9HA47 277 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 HACD3Q9P035 362 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 KCNK6Q9Y257 313 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 PRKAB1Q9Y478 270 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 ADGRG1Q9Y653 693 aa16.47■□□□□ 0.23
TRAPPC1-201ENST00000303731 SDK2Q58EX2 2172 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 HACD1B0YJ81 288 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 EFSO43281 561 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 PMPCBO75439 489 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 MT-CYBP00156 380 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 FGF3P11487 239 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 CCL4P13236 92 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 ZNF8P17098 575 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 CYLC1P35663 651 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 HMGCLP35914 325 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 TGIF1Q15583 401 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 KIAA1614Q5VZ46 1190 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 ALS2CLQ60I27 953 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 LRRTM4Q86VH4 590 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 ZFAND4Q86XD8 727 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 TC2NQ8N9U0 490 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 SPATA22Q8NHS9 363 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 FERMT1Q9BQL6 677 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 ZPBPQ9BS86 351 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 TIMM29Q9BSF4 260 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 CPNE7Q9UBL6 633 aa16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 PCYT1BQ9Y5K3 369 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC1-201ENST00000303731 TRBV23OR9-2A0A075B6M9 112 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 hCG_1818297A0A087WSY0 165 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 LOC285095A0A1B0GVY8 99 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 LILRA5A6NI73 299 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 SNX2O60749 519 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 PPFIA2O75334 1257 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 EML2O95834 649 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 SLC4A1P02730 911 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 PIRTP0C851 137 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 BPIP17213 487 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 VCLP18206 1134 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 COPS2P61201 443 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 WASHC5Q12768 1159 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 NFATC2Q13469 925 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 PPP2R5EQ16537 467 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 INSCQ1MX18 579 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 DCAF12Q5T6F0 453 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 KAZNQ674X7 775 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 ADGRG6Q86SQ4 1221 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 PLXDC1Q8IUK5 500 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 CCDC50Q8IVM0 306 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 BRSK1Q8TDC3 778 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 FCRL5Q96RD9 977 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 ZCCHC2Q9C0B9 1178 aaKnown RBP16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 KLC4Q9NSK0 619 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 SLC39A1Q9NY26 324 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 KLHL8Q9P2G9 620 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 SAE1Q9UBE0 346 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 TRHDEQ9UKU6 1024 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 PCDHA13Q9Y5I0 950 aa16.45■□□□□ 0.22
TRAPPC1-201ENST00000303731 AGRPO00253 132 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 KCNJ13O60928 360 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 CDK14O94921 469 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 IPO7O95373 1038 aaKnown RBP16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 PECAM1P16284 738 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 XRCC1P18887 633 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 NFKB1P19838 968 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 HLA-DPA1P20036 260 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 CD68P34810 354 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 WNT3AP56704 352 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 MPP3Q13368 585 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 XRCC4Q13426 336 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 GTF2H3Q13889 308 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 ARHGAP22Q7Z5H3 698 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 FAM129CQ86XR2 697 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 RBM12BQ8IXT5 1001 aaKnown RBP16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 HTR3CQ8WXA8 447 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 ART4Q93070 314 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 QKIQ96PU8 341 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 OSGEPL1Q9H4B0 414 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 SPTA1P02549 2419 aa16.44■□□□□ 0.22
TRAPPC1-201ENST00000303731 EFCAB7A8K855 629 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 APOC4-APOC2K7ER74 178 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 ZNF189O75820 626 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 APOC2P02655 101 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 SFTPCP11686 197 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 ZNF7P17097 686 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 UBE2IP63279 158 aaKnown RBP16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 LY6DQ14210 128 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 KDELC1Q6UW63 502 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 CEACAM20Q6UY09 585 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 WASH2PQ6VEQ5 465 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 BBS12Q6ZW61 710 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 PID1Q7Z2X4 250 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 DAAM2Q86T65 1068 aa16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 ZC3H18Q86VM9 953 aaKnown RBP16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 ZNF761Q86XN6 746 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC1-201ENST00000303731 TRIM48Q8IWZ4 208 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms