RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 DPY30Q9C005 99 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 SDCBP2Q9H190 292 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 MCUBQ9NWR8 336 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF510Q9Y2H8 683 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 MEMO1Q9Y316 297 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 SPATA31A1Q5TZJ5 1347 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 AZIN1O14977 448 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FOXN1O15353 648 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 TGOLN2O43493 480 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NUAK1O60285 661 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 GNRH1P01148 92 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DBTP11182 482 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NPR2P20594 1047 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DSG3P32926 999 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 OSTNP61366 133 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NOMO3P69849 1222 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 IFI35P80217 286 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 EEF1A2Q05639 463 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FGL1Q08830 312 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF284Q2VY69 593 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ATF7IP2Q5U623 682 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF367Q7RTV3 350 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 LDHDQ86WU2 507 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM192Q8IY95 271 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAM47BQ8NA70 645 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 AVL9Q8NBF6 648 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 BPIFB6Q8NFQ5 453 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 OR2W6PQ8NHA6 318 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CHPT1Q8WUD6 406 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CPNE2Q96FN4 548 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 USB1Q9BQ65 265 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ELOVL6Q9H5J4 265 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC35C2Q9NQQ7 365 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CLIC5Q9NZA1 410 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NDOR1Q9UHB4 597 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 GNEQ9Y223 722 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ATF5Q9Y2D1 282 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DOCK7Q96N67 2140 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 GNG14A0A1W2PPG7 69 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DHX15O43143 795 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF432O94892 652 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 POMCP01189 267 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SPARCP09486 303 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAM153BP0C7A2 387 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A1P22309 533 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CYP4F8P98187 520 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PON3Q15166 354 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ATP6AP1Q15904 470 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAM153CQ494X1 144 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 AGKQ53H12 422 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 USP51Q70EK9 711 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 TXNRD3Q86VQ6 643 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAM20CQ8IXL6 584 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAM71DQ8N9W8 422 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 KBTBD7Q8WVZ9 684 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NELL1Q92832 810 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SERAC1Q96JX3 654 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 COL21A1Q96P44 957 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 APOL5Q9BWW9 433 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 RNF146Q9NTX7 359 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SNX8Q9Y5X2 465 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ABCA1O95477 2261 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 A0A0J9YVX5 310 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC30A4O14863 429 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ITM2AO43736 263 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC22A3O75751 556 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 MATN4O95460 622 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NAT2P11245 290 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PLK1P53350 603 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NEPROQ6NW34 567 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PHF10Q8WUB8 498 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 KCTD13Q8WZ19 329 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NACC2Q96BF6 587 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DHRS1Q96LJ7 313 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 WWOXQ9NZC7 414 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 KANSL3Q9P2N6 904 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAM170AA1A519 330 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 KERAO60938 352 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 GSTT2P0CG29 244 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 MYF6P23409 242 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PTGS2P35354 604 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 POLR2LP62875 67 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CYP4F2P78329 520 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CYP4F3Q08477 520 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DAG1Q14118 895 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 C2orf76Q3KRA6 126 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ALG10Q5BKT4 473 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SGO1Q5FBB7 561 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 LAYNQ6UX15 382 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DSG4Q86SJ6 1040 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 TOP6BLQ8N6T0 577 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DNAJA4Q8WW22 397 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC41A3Q96GZ6 507 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PCBD2Q9H0N5 130 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CMTM6Q9NX76 183 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FBXO10Q9UK96 956 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 DUSP12Q9UNI6 340 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 LINC00854A0A1B0GVQ3 168 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CLRN2A0PK11 232 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms