RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SLC38A8A6NNN8 435 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 INSIG1O15503 277 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 HTRA2O43464 458 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 CA12O43570 354 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 STAMBPO95630 424 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 MT-ND1P03886 318 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 ARL1P40616 181 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 HK3P52790 923 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 CDH15P55291 814 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 GPR17Q13304 367 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 TMED1Q13445 227 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 PLA2G4EQ3MJ16 856 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 ZRANB3Q5FWF4 1079 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 ACBD5Q5T8D3 534 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-204ENST00000300862 FUT10Q6P4F1 479 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 EEF1AKMT1Q8WVE0 214 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 PSKH2Q96QS6 385 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 EFHD1Q9BUP0 239 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 DERL2Q9GZP9 239 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 SYTL2Q9HCH5 934 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 V9GYQ6 96 aa12.8□□□□□ -0.36
HIF3A-204ENST00000300862 LCHNA4D1U4 455 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 FAM155AB1AL88 458 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 H3BNC9 293 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 ALDH2P05091 517 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 GNAO1P09471 354 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 UFM1P61960 85 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 PLOD1Q02809 727 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 RBBP7Q16576 425 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 PAGE3Q5JUK9 113 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 CPNE9Q8IYJ1 553 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 CBR4Q8N4T8 237 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 OR2T11Q8NH01 316 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 MIPOL1Q8TD10 442 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 DDI1Q8WTU0 396 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 WBP2Q969T9 261 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 TMIGD2Q96BF3 282 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 TMEM74Q96NL1 305 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 HGH1Q9BTY7 390 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 LIN28AQ9H9Z2 209 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 DUS2Q9NX74 493 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 EIF2B4Q9UI10 523 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 CNOT11Q9UKZ1 510 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 PADI4Q9UM07 663 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 GPR45Q9Y5Y3 372 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 DHRS12A0PJE2 317 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 ASPDHA6ND91 283 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 SNAP91O60641 907 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 ATP6V1G1O75348 118 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 MC4RP32245 332 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 ATP5C1P36542 298 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 MAGEA8P43361 318 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 NFYCQ13952 458 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 KRT80Q6KB66 452 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 KLHL35Q6PF15 583 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 BLOC1S3Q6QNY0 202 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 AFTPHQ6ULP2 937 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 RNF180Q86T96 592 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 BBS5Q8N3I7 341 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 CDYL2Q8N8U2 506 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 TET1Q8NFU7 2136 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 TSPAN14Q8NG11 270 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 BCL7CQ8WUZ0 217 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 PEX13Q92968 403 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 BHMTQ93088 406 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 HSPBAP1Q96EW2 488 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 LINGO1Q96FE5 620 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 OSBPL11Q9BXB4 747 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 MAGEH1Q9H213 219 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 POPDC3Q9HBV1 291 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 INTS10Q9NVR2 710 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 DNMT3LQ9UJW3 386 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 AGO1Q9UL18 857 aaKnown RBP12.79□□□□□ -0.36
HIF3A-204ENST00000300862 RAI2Q9Y5P3 530 aa12.79□□□□□ -0.36
HIF3A-204ENST00000300862 C2orf81A6NN90 581 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 BBIP1A8MTZ0 92 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 INPP4BO15327 924 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TSPAN12O95859 305 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CYBBP04839 570 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 RHOCP08134 193 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 ZDHHC11BP0C7U3 371 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TAF1AQ15573 450 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 ERMP1Q7Z2K6 904 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CARM1Q86X55 608 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 FAM47BQ8NA70 645 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 OR52B6Q8NGF0 335 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CCT7Q99832 543 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 HOPXQ9BPY8 73 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 SLC52A3Q9NQ40 469 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms