RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ATP4AP20648 1035 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ADRA1DP25100 572 aa12□□□□□ -0.49
PCF11-201ENST00000298281 PLGLAQ15195 96 aa12□□□□□ -0.49
PCF11-201ENST00000298281 KLHL26Q53HC5 615 aa12□□□□□ -0.49
PCF11-201ENST00000298281 TRMT10AQ8TBZ6 339 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 ADAM2Q99965 735 aa12□□□□□ -0.49
PCF11-201ENST00000298281 NIFKQ9BYG3 293 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 CEMIPQ8WUJ3 1361 aa12□□□□□ -0.49
PCF11-201ENST00000298281 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
PCF11-201ENST00000298281 HHLA1C9JL84 531 aa12□□□□□ -0.49
PCF11-201ENST00000298281 SCAMP3O14828 347 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 DRD4P21917 467 aa12□□□□□ -0.49
PCF11-201ENST00000298281 PGDP52209 483 aa12□□□□□ -0.49
PCF11-201ENST00000298281 LARS2Q15031 903 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 FAM76BQ5HYJ3 339 aa12□□□□□ -0.49
PCF11-201ENST00000298281 PRAMEF17Q5VTA0 474 aa12□□□□□ -0.49
PCF11-201ENST00000298281 OLFML1Q6UWY5 402 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ISLR2Q6UXK2 745 aa12□□□□□ -0.49
PCF11-201ENST00000298281 C1GALT1C1Q96EU7 318 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CNOT6Q9ULM6 557 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 H3BM21 787 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CYP4B1P13584 511 aa12□□□□□ -0.49
PCF11-201ENST00000298281 OGNP20774 298 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 SLC7A1P30825 629 aa12□□□□□ -0.49
PCF11-201ENST00000298281 SULT2A1Q06520 285 aa12□□□□□ -0.49
PCF11-201ENST00000298281 PHF19Q5T6S3 580 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ZNF565Q8N9K5 539 aa12□□□□□ -0.49
PCF11-201ENST00000298281 PNLDC1Q8NA58 520 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 ASF1AQ9Y294 204 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ZNF878C9JN71 531 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 VNN2O95498 520 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CFIP05156 583 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 AIF1P55008 147 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 B3GNT6Q6ZMB0 384 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ARHGAP36Q6ZRI8 547 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SFRP1Q8N474 314 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 FBXO15Q8NCQ5 510 aaPredicted RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ZNF670Q9BS34 389 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.99□□□□□ -0.499e-8■■■■■ 35.5
PCF11-201ENST00000298281 BPIFA1Q9NP55 256 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 PLEKHA6Q9Y2H5 1048 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 FGF19O95750 216 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TRUB2O95900 331 aaKnown RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 CLCN7P51798 805 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SCN1BQ07699 218 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ZDHHC20Q5W0Z9 365 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 PLCZ1Q86YW0 608 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 RNF148Q8N7C7 305 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TEX19Q8NA77 164 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TIFAQ96CG3 184 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ACAT2Q9BWD1 397 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 DNAJC18Q9H819 358 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CLUHO75153 1309 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CPS1P31327 1500 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 OR2AT4A6NND4 320 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 GPR89AB7ZAQ6 455 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TPP1O14773 563 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 GPR89BP0CG08 455 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CCNB1P14635 433 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SLC9B1Q4ZJI4 515 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 INTS5Q6P9B9 1019 aaKnown RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 SYCE2Q6PIF2 218 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ARSKQ6UWY0 536 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 POU5F2Q8N7G0 328 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 PIK3C3Q8NEB9 887 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SETD7Q8WTS6 366 aaKnown RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 KXD1Q9BQD3 176 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ALG9Q9H6U8 611 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 GDF3Q9NR23 364 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 GMIPQ9P107 970 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 NDRG2Q9UN36 371 aaKnown RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CLDN4O14493 209 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TBL1XO60907 577 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 VIPP01282 170 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ITGAVP06756 1048 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ADH1AP07327 375 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 COL6A1P12109 1028 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 OLR1P78380 273 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 CXCL9Q07325 125 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SLC34A3Q8N130 599 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 PLEKHG4BQ96PX9 1271 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TRMOQ9BU70 441 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ZNF700Q9H0M5 742 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SEMA3GQ9NS98 782 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 C15orf41Q9Y2V0 281 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 TRBV23OR9-2A0A075B6M9 112 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 HDCP19113 662 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 PRKCDQ05655 676 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 NAE1Q13564 534 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 RGS21Q2M5E4 152 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 VANGL1Q8TAA9 524 aaPredicted RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 AP2M1Q96CW1 435 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SEMA4BQ9NPR2 832 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms