RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CNOT6Q9ULM6 557 aaKnown RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 NCKAP1Q9Y2A7 1128 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 PRSS21Q9Y6M0 314 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 GLRA3O75311 464 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 ASMTLO95671 621 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 ACADMP11310 421 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 NSG1P42857 185 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 GUCY1A3Q02108 690 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 CCDC91Q7Z6B0 441 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 LCA5Q86VQ0 697 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 CENPLQ8N0S6 344 aaPredicted RBP24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 DDHD1Q8NEL9 900 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 UBXN10Q96LJ8 280 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 C1QTNF2Q9BXJ5 285 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 CLPBQ9H078 707 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 KDM4CQ9H3R0 1056 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D17Q9HA65 648 aa24.39■■□□□ 1.49
GTF2A1-201ENST00000298173 DHRS4L1P0CG22 281 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 TPMTP51580 245 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 RPS21P63220 83 aaKnown RBP24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 TMEM259Q4ZIN3 620 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 TAF1BQ53T94 588 aaPredicted RBP24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 SEL1L3Q68CR1 1132 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 NEK5Q6P3R8 708 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 KIAA1324Q6UXG2 1013 aaKnown RBP24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 MACC1Q6ZN28 852 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 CLDN19Q8N6F1 224 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 FLCNQ8NFG4 579 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 KCNJ9Q92806 393 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 GLYATL1Q969I3 302 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 PREBQ9HCU5 417 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 CD93Q9NPY3 652 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 ZNF358Q9NW07 568 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 TAS2R13Q9NYV9 303 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 EMCNQ9ULC0 261 aa24.38■■□□□ 1.49
GTF2A1-201ENST00000298173 A0A087X1B8 175 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 K7ESM1 405 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 SLC26A3P40879 764 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 FGL2Q14314 439 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 KIAA1161Q6NSJ0 714 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 SPNS2Q8IVW8 549 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 HMGB4Q8WW32 186 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 GPR78Q96P69 363 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 GPAMQ9HCL2 828 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 MLXIPLQ9NP71 852 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 TMEM216Q9P0N5 145 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 USP36Q9P275 1121 aaKnown RBP24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 GALPQ9UBC7 116 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 OAS3Q9Y6K5 1087 aaKnown RBP24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 NIPSNAP2O75323 286 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 RHOBTB1O94844 696 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 IGLV3-19P01714 112 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 DLG1Q12959 904 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 LRRC14Q15048 493 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 MAP7D1Q3KQU3 841 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 LVRNQ6Q4G3 990 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 KYAT3Q6YP21 454 aaKnown RBP24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 PIM3Q86V86 326 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 MGARPQ8TDB4 240 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 FAM111AQ96PZ2 611 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 IQCGQ9H095 443 aaKnown RBP24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 GNPTGQ9UJJ9 305 aa24.37■■□□□ 1.49
GTF2A1-201ENST00000298173 C10orf142B7Z368 130 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 DNAJC6O75061 913 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 KLHL2O95198 593 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 WSCD2Q2TBF2 565 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 KHDC1Q4VXA5 237 aaKnown RBP24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 N4BP2L1Q5TBK1 243 aaPredicted RBP24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 PJA1Q8NG27 643 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 HEXDCQ8WVB3 486 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 ANKRD49Q8WVL7 239 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 CAPS2Q9BXY5 557 aa24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 MBD1Q9UIS9 605 aaPredicted RBP24.36■■□□□ 1.49
GTF2A1-201ENST00000298173 A0A1W2PQU0 124 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 A6NNZ2 444 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 IQCF5A8MTL0 148 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 H3BMM5 538 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 RNGTTO60942 597 aaKnown RBP24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 SKIV2L2P42285 1042 aaKnown RBP24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 CLCN7P51798 805 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 TUBB8Q3ZCM7 444 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 LDLRAP1Q5SW96 308 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 TTC19Q6DKK2 380 aaPredicted RBP24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 C16orf46Q6P387 395 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 HORMAD1Q86X24 394 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 TMEM151AQ8N4L1 468 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 NAT14Q8WUY8 206 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 KCTD4Q8WVF5 259 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 NXNL1Q96CM4 212 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 GPR21Q99679 349 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 CHRDQ9H2X0 955 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 LATS2Q9NRM7 1088 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 IGSF5Q9NSI5 407 aa24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 RUVBL2Q9Y230 463 aaKnown RBP24.35■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3DA0A087WVF3 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3IA0A087WXS9 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3EA0A087X179 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3KA0A087X1G2 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3FA6NER0 549 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3LB9A6J9 549 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms