RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 XKR4Q5GH76 650 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 IRGCQ6NXR0 463 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 DNAJB14Q8TBM8 379 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 TAF13Q15543 124 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 RFTN2Q52LD8 501 aaPredicted RBP17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 MED27Q6P2C8 311 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 CAMK1DQ8IU85 385 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 APOLD1Q96LR9 279 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 OR2AG1Q9H205 316 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 COX4I1P13073 169 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 TYRP14679 529 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 EPHA3P29320 983 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 ACAP2Q15057 778 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 TMEM139Q8IV31 216 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 NXNL1Q96CM4 212 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 IPPKQ9H8X2 491 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 A0A1W2PPM1 405 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC22A3O75751 556 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 TRBC1P01850 177 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 HOXB2P14652 356 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SOX6P35712 828 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 PSME3P61289 254 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 TTMPQ5BVD1 217 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SULT1C3Q6IMI6 304 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 RINLQ6ZS11 566 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 GPR141Q7Z602 305 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 PPP1R14AQ96A00 147 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SFXN1Q9H9B4 322 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 POLR3BQ9NW08 1133 aaPredicted RBP17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 DNAJB4Q9UDY4 337 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 FAM20BO75063 409 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 NMBRP28336 390 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 TRIM32Q13049 653 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 UPP1Q16831 310 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF248Q8NDW4 579 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 CMASQ8NFW8 434 aaPredicted RBP17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 C12orf66Q96MD2 445 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SPAG4Q9NPE6 437 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF180Q9UJW8 692 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 POLR3HQ9Y535 204 aaPredicted RBP17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 HS3ST4Q9Y661 456 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 RBM47A0AV96 593 aaKnown RBP17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 PI15O43692 258 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 NDUFS1P28331 727 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 INO80DQ53TQ3 878 aaPredicted RBP17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 MORN1Q5T089 497 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SPATA19Q7Z5L4 167 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 EPHX4Q8IUS5 362 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 TMEM79Q9BSE2 394 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 MCMBPQ9BTE3 642 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 SIX4Q9UIU6 781 aa17.57■□□□□ 0.4
CDC42EP3-201ENST00000295324 CLOCKO15516 846 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 SNX3O60493 162 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 MYL12AP19105 171 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 ADAMTS15Q8TE58 950 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 BTBD9Q96Q07 612 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 RIBC2Q9H4K1 309 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 PDP2Q9P2J9 529 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 LEFTY2O00292 366 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZBTB22O15209 634 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 PCSK2P16519 638 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 RNF44Q7L0R7 432 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 CYB5D2Q8WUJ1 264 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 SUCOQ9UBS9 1254 aaKnown RBP17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 CRYBG1Q9Y4K1 1723 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 DYTNA2CJ06 578 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 HSMCR30P0CW71 290 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 PSMD7P51665 324 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 ENPP7Q6UWV6 458 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 TSSK3Q96PN8 268 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 CARS2Q9HA77 564 aaKnown RBP17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 FBXL12Q9NXK8 326 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 PLLPQ9Y342 182 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 RGS5O15539 181 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 CHRNA1P02708 482 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 RB1P06400 928 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 MINDY4Q4G0A6 757 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 RALGPS1Q5JS13 557 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 HFE2Q6ZVN8 426 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 AVL9Q8NBF6 648 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 SPOCK2Q92563 424 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 DEPDC7Q96QD5 511 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 ADAMTS10Q9H324 1103 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 RPRD1BQ9NQG5 326 aaKnown RBP17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 HLA-DQA2P01906 255 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 VARSP26640 1264 aaKnown RBP17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 FEN1P39748 380 aaKnown RBP17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 IZUMO2Q6UXV1 221 aa17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 PTCD3Q96EY7 689 aaKnown RBP17.56■□□□□ 0.4
CDC42EP3-201ENST00000295324 TK2O00142 265 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 MAP2K7O14733 419 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 STXBP1P61764 594 aaKnown RBP17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 EPS8Q12929 822 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC22A18Q96BI1 424 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC6A2P23975 617 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 HSD17B2P37059 387 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms