RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CDC23Q9UJX2 597 aa19.65■□□□□ 0.74
TIMP4-201ENST00000287814 DNALI1O14645 258 aaPredicted RBP19.64■□□□□ 0.73
TIMP4-201ENST00000287814 CHUKO15111 745 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 GRID2O43424 1007 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 CDK14O94921 469 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 ALPPL2P10696 532 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 ACVR1Q04771 509 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 SYDE1Q6ZW31 735 aaPredicted RBP19.64■□□□□ 0.73
TIMP4-201ENST00000287814 GKN2Q86XP6 184 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 ZNF547Q8IVP9 402 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 PPIL6Q8IXY8 311 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 FAM181AQ8N9Y4 354 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 HDAC10Q969S8 669 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 SERPINB12Q96P63 405 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 BOCQ9BWV1 1114 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 IL22Q9GZX6 179 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 SPATS2LQ9NUQ6 558 aaKnown RBP19.64■□□□□ 0.73
TIMP4-201ENST00000287814 DOLKQ9UPQ8 538 aa19.64■□□□□ 0.73
TIMP4-201ENST00000287814 ZNF106Q9H2Y7 1883 aaKnown RBP19.64■□□□□ 0.73
TIMP4-201ENST00000287814 COL5A1P20908 1838 aaPredicted RBP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 CCDC162PA2VCL2 907 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 AP3B1O00203 1094 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 VEGFDO43915 354 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 C6orf132Q5T0Z8 1188 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 N4BP2L1Q5TBK1 243 aaPredicted RBP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 ZCCHC8Q6NZY4 707 aaKnown RBP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 LVRNQ6Q4G3 990 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 CHST15Q7LFX5 561 aaPredicted RBP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 ZNF572Q7Z3I7 529 aaPredicted RBP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 SNX20Q7Z614 316 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 SLC35F3Q8IY50 421 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 PIANPQ8IYJ0 282 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 AGGF1Q8N302 714 aaeCLIP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 SDR16C5Q8N3Y7 309 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 RASGEF1AQ8N9B8 481 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 PPHLN1Q8NEY8 458 aaKnown RBP19.63■□□□□ 0.73
TIMP4-201ENST00000287814 RMI1Q9H9A7 625 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 SLC23A2Q9UGH3 650 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 RIMKLBQ9ULI2 386 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 SLC30A1Q9Y6M5 507 aa19.63■□□□□ 0.73
TIMP4-201ENST00000287814 ITGALP20701 1170 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 NMBRP28336 390 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 CTSCP53634 463 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 SARNPP82979 210 aaKnown RBP19.62■□□□□ 0.73
TIMP4-201ENST00000287814 B4GALNT1Q00973 533 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 ILF3Q12906 894 aaKnown RBP eCLIP19.62■□□□□ 0.73
TIMP4-201ENST00000287814 DHX34Q14147 1143 aaKnown RBP19.62■□□□□ 0.73
TIMP4-201ENST00000287814 ZRANB3Q5FWF4 1079 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 LDLRAP1Q5SW96 308 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 IZUMO3Q5VZ72 239 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 SLC30A9Q6PML9 568 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 CRTC3Q6UUV7 619 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 CES3Q6UWW8 571 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 FAM46DQ8NEK8 389 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 TRIM56Q9BRZ2 755 aaKnown RBP19.62■□□□□ 0.73
TIMP4-201ENST00000287814 KIFC1Q9BW19 673 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 TREX1Q9NSU2 369 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 SIRPGQ9P1W8 387 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 GPR34Q9UPC5 381 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 PLXNB3Q9ULL4 1909 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 TRBV5-4A0A0C4DH59 114 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 FTH1P19P0C7X4 201 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 MLNP12872 115 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 ACP5P13686 325 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 CKMT2P17540 419 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 MAGEA3P43357 314 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 LAMB3Q13751 1172 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 NXPE1Q8N323 547 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 GSDMCQ9BYG8 508 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 TRIM31Q9BZY9 425 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 TAAR2Q9P1P5 351 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 CRLS1Q9UJA2 301 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 KCNK6Q9Y257 313 aa19.62■□□□□ 0.73
TIMP4-201ENST00000287814 TP73O15350 636 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 RAD51CO43502 376 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 GOT2P00505 430 aaKnown RBP19.61■□□□□ 0.73
TIMP4-201ENST00000287814 TUBB4AP04350 444 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 CKMT1AP12532 417 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 FOXN2P32314 431 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 ACTR1BP42025 376 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 ACADVLP49748 655 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 ACTR1AP61163 376 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 GPR33Q49SQ1 333 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 OGFOD3Q6PK18 319 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 NLRP9Q7RTR0 991 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 C11orf96Q7Z7L8 435 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 SCG3Q8WXD2 468 aaKnown RBP19.61■□□□□ 0.73
TIMP4-201ENST00000287814 MFSD3Q96ES6 412 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 DPEP2Q9H4A9 486 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 XAB2Q9HCS7 855 aaKnown RBP19.61■□□□□ 0.73
TIMP4-201ENST00000287814 GULP1Q9UBP9 304 aa19.61■□□□□ 0.73
TIMP4-201ENST00000287814 CACNA1AO00555 2505 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 GOLGA4Q13439 2230 aaKnown RBP19.6■□□□□ 0.73
TIMP4-201ENST00000287814 GPR89AB7ZAQ6 455 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 SGTAO43765 313 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 NOBOXO60393 691 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 DKK1O94907 266 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 EML2O95834 649 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 GPR89BP0CG08 455 aa19.6■□□□□ 0.73
TIMP4-201ENST00000287814 CACNG1Q06432 222 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms