RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SOAT2O75908 522 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 MED26O95402 600 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 CD6P30203 668 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 PTPN7P35236 360 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 RPL35P42766 123 aaKnown RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 MAP2K4P45985 399 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 EPS8Q12929 822 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF720Q7Z2F6 126 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 FAM124AQ86V42 546 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 TMEM199Q8N511 208 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 KDM1BQ8NB78 822 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 HMGCLL1Q8TB92 370 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 DEPDC1BQ8WUY9 529 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 CDCA5Q96FF9 252 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 TSEN34Q9BSV6 310 aaKnown RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF416Q9BWM5 594 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 MMP28Q9H239 520 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 MRPL47Q9HD33 250 aaKnown RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ERVK13-1Q9NX77 482 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 SLC17A6Q9P2U8 582 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 MKLN1Q9UL63 735 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 CCDC182A6NF36 153 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 EFCAB9A8MZ26 197 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 WDR64B1ANS9 1081 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 NUPL2O15504 423 aaKnown RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 USP2O75604 605 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 MT-ND1P03886 318 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 POU2F1P14859 743 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 F8A1P23610 371 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 RPS5P46782 204 aaKnown RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 ERVK-8P63133 956 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 KCNC3Q14003 757 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 IRF3Q14653 427 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 GPATCH4Q5T3I0 446 aaKnown RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 HDDC2Q7Z4H3 204 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 C11orf96Q7Z7L8 435 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 FAM35AQ86V20 835 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 P3H2Q8IVL5 708 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 ADGRF4Q8IZF3 695 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 UNC5BQ8IZJ1 945 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 UFD1Q92890 307 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 FAF2Q96CS3 445 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 SIPA1Q96FS4 1042 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 FIZ1Q96SL8 496 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 GATA5Q9BWX5 397 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 CD274Q9NZQ7 290 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 ZDHHC2Q9UIJ5 367 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 TTC24A2A3L6 582 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 G3V2L1 256 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 FZD6O60353 706 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 GMDSO60547 372 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 TSC22D2O75157 780 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 RAB3AP20336 220 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 CNTFP26441 200 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 MAOBP27338 520 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 HOXA1P49639 335 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 CD47Q08722 323 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 GPR68Q15743 365 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 AAK1Q2M2I8 961 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 DENND5AQ6IQ26 1287 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 C8orf82Q6P1X6 216 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 ENOSF1Q7L5Y1 443 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 RASGRP3Q8IV61 690 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 TRIM48Q8IWZ4 208 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 OR8K5Q8NH50 307 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 TMCO6Q96DC7 493 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 SGTBQ96EQ0 304 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 PCDHB16Q9NRJ7 776 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 CCDC167Q9P0B6 97 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 INTS6Q9UL03 887 aaKnown RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 RPH3AQ9Y2J0 694 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 RAP2CQ9Y3L5 183 aa9.15□□□□□ -0.94
PDGFC-201ENST00000274071 DDX60LQ5H9U9 1706 aaKnown RBP9.15□□□□□ -0.94
PDGFC-201ENST00000274071 C3orf70A6NLC5 250 aaPredicted RBP9.15□□□□□ -0.95
PDGFC-201ENST00000274071 SLC1A7O00341 560 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 BTN3A3O00478 584 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 ANGPT2O15123 496 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 FAM13AO94988 1023 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 C1QBP02746 253 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 LTFP02788 710 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 CFHP08603 1231 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 AKR1D1P51857 326 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 ARSFP54793 590 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 UBXN2AP68543 259 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 CBLBQ13191 982 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 Q3ZCU0 254 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 PYCR3Q53H96 274 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 SYT6Q5T7P8 510 aaPredicted RBP9.15□□□□□ -0.95
PDGFC-201ENST00000274071 SULT1C3Q6IMI6 304 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 COMMD7Q86VX2 200 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 FEZF2Q8TBJ5 459 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 SYTL5Q8TDW5 730 aaPredicted RBP9.15□□□□□ -0.95
PDGFC-201ENST00000274071 DNAJA4Q8WW22 397 aaPredicted RBP9.15□□□□□ -0.95
PDGFC-201ENST00000274071 ASB12Q8WXK4 309 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 TRMT61AQ96FX7 289 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms