RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MATN3O15232 486 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 MYO1DO94832 1006 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 CD1DP15813 335 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 LEPRP48357 1165 aaKnown RBP12.82□□□□□ -0.36
COL8A1-202ENST00000273342 SCAPQ12770 1279 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 KCNJ8Q15842 424 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 RBBP7Q16576 425 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 INAVAQ3KP66 663 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 GTF2IRD2BQ6EKJ0 949 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF549Q6P9A3 640 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 GTF2IRD2Q86UP8 949 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 ZDHHC13Q8IUH4 622 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 OR13C4Q8NGS5 318 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 DPF3Q92784 378 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 PAAF1Q9BRP4 392 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 ITM2CQ9NQX7 267 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 GALPQ9UBC7 116 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 IKZF3Q9UKT9 509 aa12.82□□□□□ -0.36
COL8A1-202ENST00000273342 M0R3G1 203 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 SLC22A3O75751 556 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 MTHFD2P13995 350 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF24P17028 368 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 CCNCP24863 283 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 SEPHS1P49903 392 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 POLR2JP52435 117 aaKnown RBP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 CD47Q08722 323 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 GRSF1Q12849 480 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 DAG1Q14118 895 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 TSNQ15631 228 aaKnown RBP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 FSCN1Q16658 493 aaKnown RBP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 TWF2Q6IBS0 349 aaKnown RBP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 OSCP1Q8WVF1 389 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF347Q96SE7 839 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 TMEM9Q9P0T7 183 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 LIMD1Q9UGP4 676 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 SEPT3Q9UH03 358 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 RNF112Q9ULX5 631 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 PDE10AQ9Y233 779 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 SNX5Q9Y5X3 404 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 GPR45Q9Y5Y3 372 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 G3V2T6 193 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 AP3B1O00203 1094 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 CDC7O00311 574 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 PSMD3O43242 534 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 E2F6O75461 281 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 IDO1P14902 403 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 ITGB6P18564 788 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 HCAR3P49019 387 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 GALNT3Q14435 633 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 SEMA3AQ14563 771 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 OXA1LQ15070 435 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 ALKAL1Q6UXT8 129 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 ZCCHC7Q8N3Z6 543 aaKnown RBP12.81□□□□□ -0.36
COL8A1-202ENST00000273342 OR2T11Q8NH01 316 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 PSMA8Q8TAA3 256 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 B3GALT6Q96L58 329 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 SMIM14Q96QK8 99 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 AMBRA1Q9C0C7 1298 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 ASB1Q9Y576 335 aa12.81□□□□□ -0.36
COL8A1-202ENST00000273342 CASTOR2A6NHX0 329 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SYCE1LA8MT33 242 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 LSM1O15116 133 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 CST1P01037 141 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ALPLP05186 524 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FMO4P31512 558 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FMO3P31513 532 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PCYT1AP49585 367 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ALDH3A2P51648 485 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 TRIM32Q13049 653 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 KCNAB2Q13303 367 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SF3B4Q15427 424 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 C6orf141Q5SZD1 244 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PAQR3Q6TCH7 311 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SLC16A12Q6ZSM3 486 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SLC22A16Q86VW1 577 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 LGI2Q8N0V4 545 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FBXO39Q8N4B4 442 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 CALML6Q8TD86 181 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 KCTD13Q8WZ19 329 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ELMO1Q92556 727 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 L3HYPDHQ96EM0 354 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 CYP2S1Q96SQ9 504 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 TRMOQ9BU70 441 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ATP13A3Q9H7F0 1226 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 MARCH7Q9H992 704 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SARS2Q9NP81 518 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PAK1IP1Q9NWT1 392 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 UXTQ9UBK9 157 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 A0A0U1RQS6 177 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 UPK1AO00322 258 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SNX2O60749 519 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms