RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 EPGNQ6UW88 154 aa12□□□□□ -0.49
SDE2-201ENST00000272091 DPPA4Q7L190 304 aa12□□□□□ -0.49
SDE2-201ENST00000272091 CPA6Q8N4T0 437 aa12□□□□□ -0.49
SDE2-201ENST00000272091 FUBP1Q96AE4 644 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 SIKE1Q9BRV8 207 aa12□□□□□ -0.49
SDE2-201ENST00000272091 WWP1Q9H0M0 922 aa12□□□□□ -0.49
SDE2-201ENST00000272091 COG4Q9H9E3 785 aa12□□□□□ -0.49
SDE2-201ENST00000272091 DHRS7Q9Y394 339 aa12□□□□□ -0.49
SDE2-201ENST00000272091 PCDHB1Q9Y5F3 818 aa12□□□□□ -0.49
SDE2-201ENST00000272091 MYO9BQ13459 2157 aa12□□□□□ -0.49
SDE2-201ENST00000272091 IGLV3-16A0A075B6K0 115 aa12□□□□□ -0.49
SDE2-201ENST00000272091 CAPN14A8MX76 684 aa12□□□□□ -0.49
SDE2-201ENST00000272091 PLK4O00444 970 aa12□□□□□ -0.49
SDE2-201ENST00000272091 KERAO60938 352 aa12□□□□□ -0.49
SDE2-201ENST00000272091 HNRNPLP14866 589 aaKnown RBP eCLIP12□□□□□ -0.49
SDE2-201ENST00000272091 HK3P52790 923 aa12□□□□□ -0.49
SDE2-201ENST00000272091 POLR2LP62875 67 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 EIF4HQ15056 248 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 FAM91A1Q658Y4 838 aa12□□□□□ -0.49
SDE2-201ENST00000272091 FRMD7Q6ZUT3 714 aa12□□□□□ -0.49
SDE2-201ENST00000272091 TREML1Q86YW5 311 aa12□□□□□ -0.49
SDE2-201ENST00000272091 RBFAQ8N0V3 343 aa12□□□□□ -0.49
SDE2-201ENST00000272091 KDM1BQ8NB78 822 aa12□□□□□ -0.49
SDE2-201ENST00000272091 HCAR2Q8TDS4 363 aa12□□□□□ -0.49
SDE2-201ENST00000272091 PTCD3Q96EY7 689 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 LRIG1Q96JA1 1093 aa12□□□□□ -0.49
SDE2-201ENST00000272091 SYTL2Q9HCH5 934 aa12□□□□□ -0.49
SDE2-201ENST00000272091 ARMCX1Q9P291 453 aa12□□□□□ -0.49
SDE2-201ENST00000272091 CRLS1Q9UJA2 301 aa12□□□□□ -0.49
SDE2-201ENST00000272091 PPM1HQ9ULR3 514 aa12□□□□□ -0.49
SDE2-201ENST00000272091 PLA2G4CQ9UP65 541 aa12□□□□□ -0.49
SDE2-201ENST00000272091 VGLL3A8MV65 326 aa12□□□□□ -0.49
SDE2-201ENST00000272091 MATN2O00339 956 aa12□□□□□ -0.49
SDE2-201ENST00000272091 ECI2O75521 394 aa12□□□□□ -0.49
SDE2-201ENST00000272091 UNC5CO95185 931 aa12□□□□□ -0.49
SDE2-201ENST00000272091 CHRM3P20309 590 aa12□□□□□ -0.49
SDE2-201ENST00000272091 IMPDH1P20839 514 aa12□□□□□ -0.49
SDE2-201ENST00000272091 IL12RB1P42701 662 aa12□□□□□ -0.49
SDE2-201ENST00000272091 GRIN2CQ14957 1233 aa12□□□□□ -0.49
SDE2-201ENST00000272091 MACC1Q6ZN28 852 aa12□□□□□ -0.49
SDE2-201ENST00000272091 EXT2Q93063 718 aa12□□□□□ -0.49
SDE2-201ENST00000272091 SLC7A6OSQ96CW6 309 aaPredicted RBP12□□□□□ -0.49
SDE2-201ENST00000272091 LINGO1Q96FE5 620 aa12□□□□□ -0.49
SDE2-201ENST00000272091 TRMT6Q9UJA5 497 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 ZNF30P17039 623 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 ZNF7P17097 686 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 ITGB6P18564 788 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 ETV3P41162 512 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 SOX9P48436 509 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 ST8SIA6P61647 398 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 PIWIL4Q7Z3Z4 852 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 TECPR1Q7Z6L1 1165 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 SREK1Q8WXA9 508 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 EZH1Q92800 747 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 SCAMP4Q969E2 229 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.99□□□□□ -0.49
SDE2-201ENST00000272091 ERLEC1Q96DZ1 483 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 CCDC106Q9BWC9 280 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 ILKAPQ9H0C8 392 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 CKAP5Q14008 2032 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 EDDM13A0A1B0GTR0 161 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 PFDN6O15212 129 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 SIX3O95343 332 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 PYGLP06737 847 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 CYP2A6P11509 494 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 GDI1P31150 447 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 RPL14P50914 215 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 COL19A1Q14993 1142 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 EGFLAMQ63HQ2 1017 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 Q6ZVL8 140 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 NKAPQ8N5F7 415 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 CNDP1Q96KN2 507 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 CLPBQ9H078 707 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 SARS2Q9NP81 518 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 SLC8A2Q9UPR5 921 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 CAPN7Q9Y6W3 813 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 FADS2P1A8MWK0 482 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 KLK8O60259 260 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 ATP6V0D1P61421 351 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 KHDC1Q4VXA5 237 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 LYPLAL1Q5VWZ2 237 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 PTGR2Q8N8N7 351 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 TTYH1Q9H313 450 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 STN1Q9H668 368 aaKnown RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 ZDHHC3Q9NYG2 299 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 THAP10Q9P2Z0 257 aaPredicted RBP11.99□□□□□ -0.49
SDE2-201ENST00000272091 GNPTGQ9UJJ9 305 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 MTCH2Q9Y6C9 303 aa11.99□□□□□ -0.49
SDE2-201ENST00000272091 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 DCDC1P59894 354 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 HERVK_113P63132 956 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 ADGRE1Q14246 886 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 GPRC6AQ5T6X5 926 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 HENMT1Q5T8I9 393 aaKnown RBP11.98□□□□□ -0.49
SDE2-201ENST00000272091 SLC22A9Q8IVM8 553 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 TMIEQ8NEW7 156 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 CCDC126Q96EE4 140 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 OR52B2Q96RD2 323 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 ERVK-6Q9BXR3 956 aa11.98□□□□□ -0.49
SDE2-201ENST00000272091 CLDND1Q9NY35 253 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms